Cluster: MGYG000003192_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003192
- CGC Family ID: CGCFAM_00418
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003192_38 | MGYG000003192_38_23 | 17120 | 18100 | + | GT2 |
| pfam | MGYG000003192_38 | MGYG000003192_38_24 | 18081 | 20639 | + | YfhO |
| TF | MGYG000003192_38 | MGYG000003192_38_25 | 20701 | 21222 | + | MarR |
| TC | MGYG000003192_38 | MGYG000003192_38_26 | 21239 | 22984 | + | 3.A.1.135.7 |
| TC | MGYG000003192_38 | MGYG000003192_38_27 | 22971 | 24788 | + | 3.A.1.135.5 |
Gene ID: MGYG000003192_38_23
Type: CAZyme
Location: 17120 - 18100 (+)
Type: CAZyme
Location: 17120 - 18100 (+)
Gene ID: MGYG000003192_38_24
Type: pfam
Location: 18081 - 20639 (+)
Type: pfam
Location: 18081 - 20639 (+)
Gene ID: MGYG000003192_38_25
Type: TF
Location: 20701 - 21222 (+)
Type: TF
Location: 20701 - 21222 (+)
Gene ID: MGYG000003192_38_26
Type: TC
Location: 21239 - 22984 (+)
Type: TC
Location: 21239 - 22984 (+)
Gene ID: MGYG000003192_38_27
Type: TC
Location: 22971 - 24788 (+)
Type: TC
Location: 22971 - 24788 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Novisyntrophococcus
Species
Novisyntrophococcus sp900539175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.