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Cluster: MGYG000003192_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003192_33 MGYG000003192_33_18 17306 18217 + 3.A.1.131.1
pfam MGYG000003192_33 MGYG000003192_33_19 18210 19031 + ABC2_membrane_2 | ABC2_membrane_4
TC MGYG000003192_33 MGYG000003192_33_20 19041 19955 + 2.A.21.9.2
TF MGYG000003192_33 MGYG000003192_33_21 20042 21046 + LacI
TC MGYG000003192_33 MGYG000003192_33_22 21128 22105 + 8.A.5.1.3
pfam MGYG000003192_33 MGYG000003192_33_23 22121 22603 + HbpS-like
TC MGYG000003192_33 MGYG000003192_33_24 23053 24024 + 8.A.5.1.3
CAZyme MGYG000003192_33 MGYG000003192_33_25 24883 32382 + CBM67 | GH78
Gene ID: MGYG000003192_33_18
Type: TC
Location: 17306 - 18217 (+)
Gene ID: MGYG000003192_33_19
Type: pfam
Location: 18210 - 19031 (+)
Gene ID: MGYG000003192_33_20
Type: TC
Location: 19041 - 19955 (+)
Gene ID: MGYG000003192_33_21
Type: TF
Location: 20042 - 21046 (+)
Gene ID: MGYG000003192_33_22
Type: TC
Location: 21128 - 22105 (+)
Gene ID: MGYG000003192_33_23
Type: pfam
Location: 22121 - 22603 (+)
Gene ID: MGYG000003192_33_24
Type: TC
Location: 23053 - 24024 (+)
Gene ID: MGYG000003192_33_25
Type: CAZyme
Location: 24883 - 32382 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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