Cluster: MGYG000003192_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003192
- CGC Family ID: CGCFAM_10930
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003192_25 | MGYG000003192_25_11 | 12763 | 15492 | + | 3.A.3.2.21 |
| pfam | MGYG000003192_25 | MGYG000003192_25_12 | 15430 | 16068 | - | Mntp |
| NULL(UNKNOWN) | MGYG000003192_25 | MGYG000003192_25_13 | 16425 | 17984 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003192_25 | MGYG000003192_25_14 | 18211 | 20154 | + | GH120 |
| NULL(UNKNOWN) | MGYG000003192_25 | MGYG000003192_25_15 | 20671 | 21123 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003192_25 | MGYG000003192_25_16 | 21436 | 23091 | + | CBM91 | GH43_11 |
| STP | MGYG000003192_25 | MGYG000003192_25_17 | 23229 | 24596 | + | SBP_bac_1 |
| TC | MGYG000003192_25 | MGYG000003192_25_18 | 24777 | 25679 | + | 3.A.1.1.18 |
| TC | MGYG000003192_25 | MGYG000003192_25_19 | 25686 | 26537 | + | 3.A.1.1.18 |
| NULL(UNKNOWN) | MGYG000003192_25 | MGYG000003192_25_20 | 26584 | 26733 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003192_25 | MGYG000003192_25_21 | 26720 | 28507 | + | 8.A.59.2.1 |
Gene ID: MGYG000003192_25_11
Type: TC
Location: 12763 - 15492 (+)
Type: TC
Location: 12763 - 15492 (+)
Gene ID: MGYG000003192_25_12
Type: pfam
Location: 15430 - 16068 (-)
Type: pfam
Location: 15430 - 16068 (-)
Gene ID: MGYG000003192_25_13
Type:
Location: 16425 - 17984 (+)
Type:
Location: 16425 - 17984 (+)
Gene ID: MGYG000003192_25_14
Type: CAZyme
Location: 18211 - 20154 (+)
Type: CAZyme
Location: 18211 - 20154 (+)
Gene ID: MGYG000003192_25_15
Type:
Location: 20671 - 21123 (-)
Type:
Location: 20671 - 21123 (-)
Gene ID: MGYG000003192_25_16
Type: CAZyme
Location: 21436 - 23091 (+)
Type: CAZyme
Location: 21436 - 23091 (+)
Gene ID: MGYG000003192_25_17
Type: STP
Location: 23229 - 24596 (+)
Type: STP
Location: 23229 - 24596 (+)
Gene ID: MGYG000003192_25_18
Type: TC
Location: 24777 - 25679 (+)
Type: TC
Location: 24777 - 25679 (+)
Gene ID: MGYG000003192_25_19
Type: TC
Location: 25686 - 26537 (+)
Type: TC
Location: 25686 - 26537 (+)
Gene ID: MGYG000003192_25_20
Type:
Location: 26584 - 26733 (+)
Type:
Location: 26584 - 26733 (+)
Gene ID: MGYG000003192_25_21
Type: TC
Location: 26720 - 28507 (+)
Type: TC
Location: 26720 - 28507 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Novisyntrophococcus
Species
Novisyntrophococcus sp900539175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.