Cluster: MGYG000003192_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003192
- CGC Family ID: CGCFAM_00006
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003192_16 | MGYG000003192_16_2 | 1580 | 2851 | + | GT4 |
| CAZyme | MGYG000003192_16 | MGYG000003192_16_3 | 2864 | 3772 | + | GT2 |
| CAZyme | MGYG000003192_16 | MGYG000003192_16_4 | 3769 | 4947 | + | GT4 |
| CAZyme | MGYG000003192_16 | MGYG000003192_16_5 | 4944 | 6056 | + | GT4 |
| CAZyme | MGYG000003192_16 | MGYG000003192_16_6 | 6028 | 7050 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003192_16 | MGYG000003192_16_7 | 7066 | 8118 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003192_16 | MGYG000003192_16_8 | 8194 | 9507 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003192_16 | MGYG000003192_16_9 | 9492 | 10517 | + | 9.B.97.1.9 |
| TC | MGYG000003192_16 | MGYG000003192_16_10 | 10543 | 12009 | + | 2.A.66.2.16 |
| pfam | MGYG000003192_16 | MGYG000003192_16_11 | 12006 | 12575 | + | Hexapep | Hexapep_2 |
| NULL(UNKNOWN) | MGYG000003192_16 | MGYG000003192_16_12 | 12589 | 13416 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003192_16 | MGYG000003192_16_13 | 13429 | 14808 | + | 8.A.3.1.2 |
| TC | MGYG000003192_16 | MGYG000003192_16_14 | 14883 | 16361 | + | 8.A.3.3.3 |
Gene ID: MGYG000003192_16_2
Type: CAZyme
Location: 1580 - 2851 (+)
Type: CAZyme
Location: 1580 - 2851 (+)
Gene ID: MGYG000003192_16_3
Type: CAZyme
Location: 2864 - 3772 (+)
Type: CAZyme
Location: 2864 - 3772 (+)
Gene ID: MGYG000003192_16_4
Type: CAZyme
Location: 3769 - 4947 (+)
Type: CAZyme
Location: 3769 - 4947 (+)
Gene ID: MGYG000003192_16_5
Type: CAZyme
Location: 4944 - 6056 (+)
Type: CAZyme
Location: 4944 - 6056 (+)
Gene ID: MGYG000003192_16_6
Type: CAZyme
Location: 6028 - 7050 (+)
Type: CAZyme
Location: 6028 - 7050 (+)
Gene ID: MGYG000003192_16_7
Type:
Location: 7066 - 8118 (+)
Type:
Location: 7066 - 8118 (+)
Gene ID: MGYG000003192_16_8
Type:
Location: 8194 - 9507 (+)
Type:
Location: 8194 - 9507 (+)
Gene ID: MGYG000003192_16_9
Type: TC
Location: 9492 - 10517 (+)
Type: TC
Location: 9492 - 10517 (+)
Gene ID: MGYG000003192_16_10
Type: TC
Location: 10543 - 12009 (+)
Type: TC
Location: 10543 - 12009 (+)
Gene ID: MGYG000003192_16_11
Type: pfam
Location: 12006 - 12575 (+)
Type: pfam
Location: 12006 - 12575 (+)
Gene ID: MGYG000003192_16_12
Type:
Location: 12589 - 13416 (+)
Type:
Location: 12589 - 13416 (+)
Gene ID: MGYG000003192_16_13
Type: TC
Location: 13429 - 14808 (+)
Type: TC
Location: 13429 - 14808 (+)
Gene ID: MGYG000003192_16_14
Type: TC
Location: 14883 - 16361 (+)
Type: TC
Location: 14883 - 16361 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Novisyntrophococcus
Species
Novisyntrophococcus sp900539175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.