Cluster: MGYG000003192_CGC10
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003192
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003192_15 | MGYG000003192_15_33 | 33518 | 34042 | - | 9.B.156.3.1 |
| NULL(UNKNOWN) | MGYG000003192_15 | MGYG000003192_15_34 | 34274 | 34444 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003192_15 | MGYG000003192_15_35 | 34438 | 34680 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003192_15 | MGYG000003192_15_36 | 34863 | 36443 | - | CBM6 | CBM6 | GH16_21 |
| CAZyme | MGYG000003192_15 | MGYG000003192_15_37 | 36713 | 39208 | - | GH3 |
| pfam | MGYG000003192_15 | MGYG000003192_15_38 | 39210 | 40055 | - | BPD_transp_1 |
| TC | MGYG000003192_15 | MGYG000003192_15_39 | 40052 | 41023 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | MGYG000003192_15 | MGYG000003192_15_40 | 41082 | 42506 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003192_15 | MGYG000003192_15_41 | 42787 | 45504 | + | GH94 |
| CAZyme | MGYG000003192_15 | MGYG000003192_15_42 | 45529 | 47940 | + | GH94 |
| TF | MGYG000003192_15 | MGYG000003192_15_43 | 48209 | 48976 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003192_15 | MGYG000003192_15_44 | 49069 | 52536 | - | CBM4 | CBM4 | CBM4 | GH16_3 |
| NULL(UNKNOWN) | MGYG000003192_15 | MGYG000003192_15_45 | 52842 | 53081 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003192_15 | MGYG000003192_15_46 | 53097 | 59294 | - | CBM4 | GH16_21 |
| TC | MGYG000003192_15 | MGYG000003192_15_47 | 59878 | 61668 | - | 2.A.58.2.2 |
| NULL(UNKNOWN) | MGYG000003192_15 | MGYG000003192_15_48 | 62195 | 62722 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003192_15 | MGYG000003192_15_49 | 62737 | 63894 | - | AAA_21 |
| TC | MGYG000003192_15 | MGYG000003192_15_50 | 64056 | 64658 | - | 9.B.156.3.1 |
Gene ID: MGYG000003192_15_33
Type: TC
Location: 33518 - 34042 (-)
Type: TC
Location: 33518 - 34042 (-)
Gene ID: MGYG000003192_15_34
Type:
Location: 34274 - 34444 (-)
Type:
Location: 34274 - 34444 (-)
Gene ID: MGYG000003192_15_35
Type:
Location: 34438 - 34680 (-)
Type:
Location: 34438 - 34680 (-)
Gene ID: MGYG000003192_15_36
Type: CAZyme
Location: 34863 - 36443 (-)
Type: CAZyme
Location: 34863 - 36443 (-)
Gene ID: MGYG000003192_15_37
Type: CAZyme
Location: 36713 - 39208 (-)
Type: CAZyme
Location: 36713 - 39208 (-)
Gene ID: MGYG000003192_15_38
Type: pfam
Location: 39210 - 40055 (-)
Type: pfam
Location: 39210 - 40055 (-)
Gene ID: MGYG000003192_15_39
Type: TC
Location: 40052 - 41023 (-)
Type: TC
Location: 40052 - 41023 (-)
Gene ID: MGYG000003192_15_40
Type:
Location: 41082 - 42506 (-)
Type:
Location: 41082 - 42506 (-)
Gene ID: MGYG000003192_15_41
Type: CAZyme
Location: 42787 - 45504 (+)
Type: CAZyme
Location: 42787 - 45504 (+)
Gene ID: MGYG000003192_15_42
Type: CAZyme
Location: 45529 - 47940 (+)
Type: CAZyme
Location: 45529 - 47940 (+)
Gene ID: MGYG000003192_15_43
Type: TF
Location: 48209 - 48976 (-)
Type: TF
Location: 48209 - 48976 (-)
Gene ID: MGYG000003192_15_44
Type: CAZyme
Location: 49069 - 52536 (-)
Type: CAZyme
Location: 49069 - 52536 (-)
Gene ID: MGYG000003192_15_45
Type:
Location: 52842 - 53081 (-)
Type:
Location: 52842 - 53081 (-)
Gene ID: MGYG000003192_15_46
Type: CAZyme
Location: 53097 - 59294 (-)
Type: CAZyme
Location: 53097 - 59294 (-)
Gene ID: MGYG000003192_15_47
Type: TC
Location: 59878 - 61668 (-)
Type: TC
Location: 59878 - 61668 (-)
Gene ID: MGYG000003192_15_48
Type:
Location: 62195 - 62722 (-)
Type:
Location: 62195 - 62722 (-)
Gene ID: MGYG000003192_15_49
Type: pfam
Location: 62737 - 63894 (-)
Type: pfam
Location: 62737 - 63894 (-)
Gene ID: MGYG000003192_15_50
Type: TC
Location: 64056 - 64658 (-)
Type: TC
Location: 64056 - 64658 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Novisyntrophococcus
Species
Novisyntrophococcus sp900539175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003192_15_39 | vegan > omnivore | 2.22457 | 0.00573 |