Cluster: MGYG000003190_CGC9
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003190
- CGC Family ID: CGCFAM_00518
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003190_9 | MGYG000003190_9_46 | 48379 | 49932 | - | 3.A.1.5.20 |
| TC | MGYG000003190_9 | MGYG000003190_9_47 | 50245 | 51060 | - | 3.A.1.5.12 |
| TC | MGYG000003190_9 | MGYG000003190_9_48 | 51053 | 51850 | - | 3.A.1.5.25 |
| TC | MGYG000003190_9 | MGYG000003190_9_49 | 51863 | 53431 | - | 3.A.1.5.20 |
| TC | MGYG000003190_9 | MGYG000003190_9_50 | 53592 | 54413 | - | 3.A.1.5.38 |
| TC | MGYG000003190_9 | MGYG000003190_9_51 | 54413 | 55351 | - | 3.A.1.5.11 |
| TC | MGYG000003190_9 | MGYG000003190_9_52 | 56091 | 57422 | - | 2.A.3.2.1 |
| pfam | MGYG000003190_9 | MGYG000003190_9_53 | 57980 | 59407 | - | Lyase_1 | ASL_C2 |
| pfam | MGYG000003190_9 | MGYG000003190_9_54 | 59407 | 60618 | - | Arginosuc_synth | Arginosuc_syn_C |
| CAZyme | MGYG000003190_9 | MGYG000003190_9_55 | 60944 | 61750 | - | GT51 |
| pfam | MGYG000003190_9 | MGYG000003190_9_56 | 62114 | 62392 | + | Trns_repr_metal |
| TC | MGYG000003190_9 | MGYG000003190_9_57 | 62473 | 62733 | - | 8.A.8.1.1 |
| TC | MGYG000003190_9 | MGYG000003190_9_58 | 62855 | 64582 | - | 8.A.7.1.1 |
| pfam | MGYG000003190_9 | MGYG000003190_9_59 | 64892 | 65725 | + | DAP_epimerase | DAP_epimerase | Pro_racemase |
| TC | MGYG000003190_9 | MGYG000003190_9_60 | 65787 | 67124 | + | 2.A.35.1.2 |
| STP | MGYG000003190_9 | MGYG000003190_9_61 | 67198 | 68112 | + | PfkB |
| TC | MGYG000003190_9 | MGYG000003190_9_62 | 68146 | 70128 | + | 4.A.2.1.4 |
Gene ID: MGYG000003190_9_46
Type: TC
Location: 48379 - 49932 (-)
Type: TC
Location: 48379 - 49932 (-)
Gene ID: MGYG000003190_9_47
Type: TC
Location: 50245 - 51060 (-)
Type: TC
Location: 50245 - 51060 (-)
Gene ID: MGYG000003190_9_48
Type: TC
Location: 51053 - 51850 (-)
Type: TC
Location: 51053 - 51850 (-)
Gene ID: MGYG000003190_9_49
Type: TC
Location: 51863 - 53431 (-)
Type: TC
Location: 51863 - 53431 (-)
Gene ID: MGYG000003190_9_50
Type: TC
Location: 53592 - 54413 (-)
Type: TC
Location: 53592 - 54413 (-)
Gene ID: MGYG000003190_9_51
Type: TC
Location: 54413 - 55351 (-)
Type: TC
Location: 54413 - 55351 (-)
Gene ID: MGYG000003190_9_52
Type: TC
Location: 56091 - 57422 (-)
Type: TC
Location: 56091 - 57422 (-)
Gene ID: MGYG000003190_9_53
Type: pfam
Location: 57980 - 59407 (-)
Type: pfam
Location: 57980 - 59407 (-)
Gene ID: MGYG000003190_9_54
Type: pfam
Location: 59407 - 60618 (-)
Type: pfam
Location: 59407 - 60618 (-)
Gene ID: MGYG000003190_9_55
Type: CAZyme
Location: 60944 - 61750 (-)
Type: CAZyme
Location: 60944 - 61750 (-)
Gene ID: MGYG000003190_9_56
Type: pfam
Location: 62114 - 62392 (+)
Type: pfam
Location: 62114 - 62392 (+)
Gene ID: MGYG000003190_9_57
Type: TC
Location: 62473 - 62733 (-)
Type: TC
Location: 62473 - 62733 (-)
Gene ID: MGYG000003190_9_58
Type: TC
Location: 62855 - 64582 (-)
Type: TC
Location: 62855 - 64582 (-)
Gene ID: MGYG000003190_9_59
Type: pfam
Location: 64892 - 65725 (+)
Type: pfam
Location: 64892 - 65725 (+)
Gene ID: MGYG000003190_9_60
Type: TC
Location: 65787 - 67124 (+)
Type: TC
Location: 65787 - 67124 (+)
Gene ID: MGYG000003190_9_61
Type: STP
Location: 67198 - 68112 (+)
Type: STP
Location: 67198 - 68112 (+)
Gene ID: MGYG000003190_9_62
Type: TC
Location: 68146 - 70128 (+)
Type: TC
Location: 68146 - 70128 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella rogosae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.