Cluster: MGYG000003190_CGC8
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003190
- CGC Family ID: CGCFAM_00394
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003190_8 | MGYG000003190_8_56 | 56021 | 56638 | - | 1.A.30.2.9 |
| TC | MGYG000003190_8 | MGYG000003190_8_57 | 56674 | 61752 | - | 1.B.14.1.4 |
| TC | MGYG000003190_8 | MGYG000003190_8_58 | 61939 | 66963 | - | 1.B.14.1.4 |
| TF | MGYG000003190_8 | MGYG000003190_8_59 | 67219 | 68067 | - | HTH_AraC |
| pfam | MGYG000003190_8 | MGYG000003190_8_60 | 68411 | 68806 | - | DUF454 |
| TC | MGYG000003190_8 | MGYG000003190_8_61 | 68806 | 70173 | - | 4.A.7.1.4 |
| TC | MGYG000003190_8 | MGYG000003190_8_62 | 70205 | 70480 | - | 4.A.7.1.2 |
| TC | MGYG000003190_8 | MGYG000003190_8_63 | 70502 | 70957 | - | 4.A.7.1.1 |
| NULL(UNKNOWN) | MGYG000003190_8 | MGYG000003190_8_64 | 71443 | 71616 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003190_8 | MGYG000003190_8_65 | 72078 | 73076 | - | 2.A.20.1.7 |
| pfam | MGYG000003190_8 | MGYG000003190_8_66 | 73069 | 73698 | - | PhoU_div |
| STP | MGYG000003190_8 | MGYG000003190_8_67 | 73983 | 75449 | - | Fer4 |
| TC | MGYG000003190_8 | MGYG000003190_8_68 | 75583 | 77622 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | MGYG000003190_8 | MGYG000003190_8_69 | 77735 | 78055 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003190_8 | MGYG000003190_8_70 | 78113 | 79267 | - | GT28 |
| pfam | MGYG000003190_8 | MGYG000003190_8_71 | 79350 | 79649 | - | Bac_DNA_binding | HU-HIG |
| pfam | MGYG000003190_8 | MGYG000003190_8_72 | 79702 | 80484 | - | PRA-PH | MazG | MazG |
| TC | MGYG000003190_8 | MGYG000003190_8_73 | 80468 | 82075 | - | 2.A.66.2.14 |
Gene ID: MGYG000003190_8_56
Type: TC
Location: 56021 - 56638 (-)
Type: TC
Location: 56021 - 56638 (-)
Gene ID: MGYG000003190_8_57
Type: TC
Location: 56674 - 61752 (-)
Type: TC
Location: 56674 - 61752 (-)
Gene ID: MGYG000003190_8_58
Type: TC
Location: 61939 - 66963 (-)
Type: TC
Location: 61939 - 66963 (-)
Gene ID: MGYG000003190_8_59
Type: TF
Location: 67219 - 68067 (-)
Type: TF
Location: 67219 - 68067 (-)
Gene ID: MGYG000003190_8_60
Type: pfam
Location: 68411 - 68806 (-)
Type: pfam
Location: 68411 - 68806 (-)
Gene ID: MGYG000003190_8_61
Type: TC
Location: 68806 - 70173 (-)
Type: TC
Location: 68806 - 70173 (-)
Gene ID: MGYG000003190_8_62
Type: TC
Location: 70205 - 70480 (-)
Type: TC
Location: 70205 - 70480 (-)
Gene ID: MGYG000003190_8_63
Type: TC
Location: 70502 - 70957 (-)
Type: TC
Location: 70502 - 70957 (-)
Gene ID: MGYG000003190_8_64
Type:
Location: 71443 - 71616 (-)
Type:
Location: 71443 - 71616 (-)
Gene ID: MGYG000003190_8_65
Type: TC
Location: 72078 - 73076 (-)
Type: TC
Location: 72078 - 73076 (-)
Gene ID: MGYG000003190_8_66
Type: pfam
Location: 73069 - 73698 (-)
Type: pfam
Location: 73069 - 73698 (-)
Gene ID: MGYG000003190_8_67
Type: STP
Location: 73983 - 75449 (-)
Type: STP
Location: 73983 - 75449 (-)
Gene ID: MGYG000003190_8_68
Type: TC
Location: 75583 - 77622 (-)
Type: TC
Location: 75583 - 77622 (-)
Gene ID: MGYG000003190_8_69
Type:
Location: 77735 - 78055 (+)
Type:
Location: 77735 - 78055 (+)
Gene ID: MGYG000003190_8_70
Type: CAZyme
Location: 78113 - 79267 (-)
Type: CAZyme
Location: 78113 - 79267 (-)
Gene ID: MGYG000003190_8_71
Type: pfam
Location: 79350 - 79649 (-)
Type: pfam
Location: 79350 - 79649 (-)
Gene ID: MGYG000003190_8_72
Type: pfam
Location: 79702 - 80484 (-)
Type: pfam
Location: 79702 - 80484 (-)
Gene ID: MGYG000003190_8_73
Type: TC
Location: 80468 - 82075 (-)
Type: TC
Location: 80468 - 82075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella rogosae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.