Cluster: MGYG000003190_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003190
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003190_1 | MGYG000003190_1_248 | 256559 | 258274 | - | GH18 |
| pfam | MGYG000003190_1 | MGYG000003190_1_249 | 258428 | 259252 | + | LGT |
| pfam | MGYG000003190_1 | MGYG000003190_1_250 | 259390 | 260706 | - | GIDA | NAD_binding_8 |
| TC | MGYG000003190_1 | MGYG000003190_1_251 | 260699 | 263080 | - | 3.A.7.7.1 |
| TC | MGYG000003190_1 | MGYG000003190_1_252 | 263070 | 264296 | - | 3.A.11.1.3 |
Gene ID: MGYG000003190_1_248
Type: CAZyme
Location: 256559 - 258274 (-)
Type: CAZyme
Location: 256559 - 258274 (-)
Gene ID: MGYG000003190_1_249
Type: pfam
Location: 258428 - 259252 (+)
Type: pfam
Location: 258428 - 259252 (+)
Gene ID: MGYG000003190_1_250
Type: pfam
Location: 259390 - 260706 (-)
Type: pfam
Location: 259390 - 260706 (-)
Gene ID: MGYG000003190_1_251
Type: TC
Location: 260699 - 263080 (-)
Type: TC
Location: 260699 - 263080 (-)
Gene ID: MGYG000003190_1_252
Type: TC
Location: 263070 - 264296 (-)
Type: TC
Location: 263070 - 264296 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella rogosae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.