Cluster: MGYG000003189_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003189
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003189_7 | MGYG000003189_7_64 | 65913 | 67298 | - | 2.A.47.5.2 |
| TC | MGYG000003189_7 | MGYG000003189_7_65 | 67454 | 68680 | - | 2.A.1.12.1 |
| TF | MGYG000003189_7 | MGYG000003189_7_66 | 68855 | 69565 | + | GntR |
| pfam | MGYG000003189_7 | MGYG000003189_7_67 | 69555 | 70628 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3 |
| CAZyme | MGYG000003189_7 | MGYG000003189_7_68 | 70639 | 71745 | + | GH177 |
Gene ID: MGYG000003189_7_64
Type: TC
Location: 65913 - 67298 (-)
Type: TC
Location: 65913 - 67298 (-)
Gene ID: MGYG000003189_7_65
Type: TC
Location: 67454 - 68680 (-)
Type: TC
Location: 67454 - 68680 (-)
Gene ID: MGYG000003189_7_66
Type: TF
Location: 68855 - 69565 (+)
Type: TF
Location: 68855 - 69565 (+)
Gene ID: MGYG000003189_7_67
Type: pfam
Location: 69555 - 70628 (+)
Type: pfam
Location: 69555 - 70628 (+)
Gene ID: MGYG000003189_7_68
Type: CAZyme
Location: 70639 - 71745 (+)
Type: CAZyme
Location: 70639 - 71745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_O
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.