Cluster: MGYG000003189_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003189
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003189_4 | MGYG000003189_4_35 | 34148 | 35230 | + | 9.B.146.1.6 |
| pfam | MGYG000003189_4 | MGYG000003189_4_36 | 35293 | 36606 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | MGYG000003189_4 | MGYG000003189_4_37 | 36621 | 37805 | + | 2.A.103.1.1 |
| CAZyme | MGYG000003189_4 | MGYG000003189_4_38 | 37814 | 38866 | + | GT28 |
Gene ID: MGYG000003189_4_35
Type: TC
Location: 34148 - 35230 (+)
Type: TC
Location: 34148 - 35230 (+)
Gene ID: MGYG000003189_4_36
Type: pfam
Location: 35293 - 36606 (+)
Type: pfam
Location: 35293 - 36606 (+)
Gene ID: MGYG000003189_4_37
Type: TC
Location: 36621 - 37805 (+)
Type: TC
Location: 36621 - 37805 (+)
Gene ID: MGYG000003189_4_38
Type: CAZyme
Location: 37814 - 38866 (+)
Type: CAZyme
Location: 37814 - 38866 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_O
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.