Cluster: MGYG000003189_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003189
- CGC Family ID: CGCFAM_00002
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003189_2 | MGYG000003189_2_58 | 58713 | 59465 | + | GT2 |
| CAZyme | MGYG000003189_2 | MGYG000003189_2_59 | 59471 | 60355 | + | GT2 |
| pfam | MGYG000003189_2 | MGYG000003189_2_60 | 60368 | 61474 | + | EpsG |
| CAZyme | MGYG000003189_2 | MGYG000003189_2_61 | 61495 | 62409 | + | GT100 |
| TC | MGYG000003189_2 | MGYG000003189_2_62 | 62402 | 63820 | + | 9.B.18.1.2 |
Gene ID: MGYG000003189_2_58
Type: CAZyme
Location: 58713 - 59465 (+)
Type: CAZyme
Location: 58713 - 59465 (+)
Gene ID: MGYG000003189_2_59
Type: CAZyme
Location: 59471 - 60355 (+)
Type: CAZyme
Location: 59471 - 60355 (+)
Gene ID: MGYG000003189_2_60
Type: pfam
Location: 60368 - 61474 (+)
Type: pfam
Location: 60368 - 61474 (+)
Gene ID: MGYG000003189_2_61
Type: CAZyme
Location: 61495 - 62409 (+)
Type: CAZyme
Location: 61495 - 62409 (+)
Gene ID: MGYG000003189_2_62
Type: TC
Location: 62402 - 63820 (+)
Type: TC
Location: 62402 - 63820 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_O
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.