Cluster: MGYG000003189_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003189
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003189_45 | MGYG000003189_45_4 | 4046 | 5896 | + | 3.A.18.1.1 |
| CAZyme | MGYG000003189_45 | MGYG000003189_45_5 | 5992 | 7386 | + | GH23 |
| NULL(UNKNOWN) | MGYG000003189_45 | MGYG000003189_45_6 | 7442 | 7585 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003189_45 | MGYG000003189_45_7 | 7634 | 7957 | - | Ribosomal_S30AE |
| TC | MGYG000003189_45 | MGYG000003189_45_8 | 8199 | 9569 | - | 2.A.25.1.4 |
Gene ID: MGYG000003189_45_4
Type: TC
Location: 4046 - 5896 (+)
Type: TC
Location: 4046 - 5896 (+)
Gene ID: MGYG000003189_45_5
Type: CAZyme
Location: 5992 - 7386 (+)
Type: CAZyme
Location: 5992 - 7386 (+)
Gene ID: MGYG000003189_45_6
Type:
Location: 7442 - 7585 (+)
Type:
Location: 7442 - 7585 (+)
Gene ID: MGYG000003189_45_7
Type: pfam
Location: 7634 - 7957 (-)
Type: pfam
Location: 7634 - 7957 (-)
Gene ID: MGYG000003189_45_8
Type: TC
Location: 8199 - 9569 (-)
Type: TC
Location: 8199 - 9569 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_O
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003189_45_4 | vegan > omnivore | 1.38894 | 0.00918 |
| MGYG000003189_45_5 | vegetarian > omnivore | 1.49076 | 0.01553 |
| MGYG000003189_45_6 | vegan > omnivore | 1.01588 | 0.00918 |
| MGYG000003189_45_6 | vegetarian > omnivore | 1.41227 | 0.01553 |