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Cluster: MGYG000003189_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003189_1 MGYG000003189_1_60 51556 52683 + GH102
TC MGYG000003189_1 MGYG000003189_1_61 52683 53444 + 3.A.16.1.3
TC MGYG000003189_1 MGYG000003189_1_62 53613 54599 + 3.A.1.15.5
pfam MGYG000003189_1 MGYG000003189_1_63 54891 57026 + UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st
TC MGYG000003189_1 MGYG000003189_1_64 57063 58967 - 2.A.37.1.2
Gene ID: MGYG000003189_1_60
Type: CAZyme
Location: 51556 - 52683 (+)
Gene ID: MGYG000003189_1_61
Type: TC
Location: 52683 - 53444 (+)
Gene ID: MGYG000003189_1_62
Type: TC
Location: 53613 - 54599 (+)
Gene ID: MGYG000003189_1_63
Type: pfam
Location: 54891 - 57026 (+)
Gene ID: MGYG000003189_1_64
Type: TC
Location: 57063 - 58967 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003189_1_60 vegetarian > omnivore 1.20198 0.01553
MGYG000003189_1_61 vegan > omnivore 1.36897 0.00918
MGYG000003189_1_61 vegetarian > omnivore 1.55287 0.01553
MGYG000003189_1_62 vegan > omnivore 1.02957 0.00918
MGYG000003189_1_63 vegetarian > omnivore 1.28094 0.01553
MGYG000003189_1_63 vegan > omnivore 1.25862 0.00918
MGYG000003189_1_64 vegetarian > vegan 1.03947 0.02615
MGYG000003189_1_64 vegetarian > omnivore 1.03762 0.01553

🧭 Explore Read Mapping of CGC

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