Cluster: MGYG000003189_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003189
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003189_28 | MGYG000003189_28_2 | 1015 | 2520 | + | GH77 |
| CAZyme | MGYG000003189_28 | MGYG000003189_28_3 | 2520 | 4787 | + | GT35 |
| pfam | MGYG000003189_28 | MGYG000003189_28_4 | 4797 | 5588 | + | Exo_endo_phos |
| TC | MGYG000003189_28 | MGYG000003189_28_5 | 5599 | 7263 | + | 4.A.1.1.11 |
Gene ID: MGYG000003189_28_2
Type: CAZyme
Location: 1015 - 2520 (+)
Type: CAZyme
Location: 1015 - 2520 (+)
Gene ID: MGYG000003189_28_3
Type: CAZyme
Location: 2520 - 4787 (+)
Type: CAZyme
Location: 2520 - 4787 (+)
Gene ID: MGYG000003189_28_4
Type: pfam
Location: 4797 - 5588 (+)
Type: pfam
Location: 4797 - 5588 (+)
Gene ID: MGYG000003189_28_5
Type: TC
Location: 5599 - 7263 (+)
Type: TC
Location: 5599 - 7263 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_O
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.