Cluster: MGYG000003189_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003189
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003189_15 | MGYG000003189_15_42 | 41257 | 41928 | - | 3.A.1.122.8 |
| pfam | MGYG000003189_15 | MGYG000003189_15_43 | 41930 | 43063 | - | FtsX | MacB_PCD |
| TC | MGYG000003189_15 | MGYG000003189_15_44 | 43050 | 44390 | - | 3.A.1.122.8 |
| pfam | MGYG000003189_15 | MGYG000003189_15_45 | 44390 | 45784 | - | YHS | FtrD-like |
| TC | MGYG000003189_15 | MGYG000003189_15_46 | 45900 | 46421 | - | 2.A.108.2.10 |
| TC | MGYG000003189_15 | MGYG000003189_15_47 | 46450 | 48354 | - | 2.A.108.2.10 |
| CAZyme | MGYG000003189_15 | MGYG000003189_15_48 | 48574 | 50973 | - | GT51 |
Gene ID: MGYG000003189_15_42
Type: TC
Location: 41257 - 41928 (-)
Type: TC
Location: 41257 - 41928 (-)
Gene ID: MGYG000003189_15_43
Type: pfam
Location: 41930 - 43063 (-)
Type: pfam
Location: 41930 - 43063 (-)
Gene ID: MGYG000003189_15_44
Type: TC
Location: 43050 - 44390 (-)
Type: TC
Location: 43050 - 44390 (-)
Gene ID: MGYG000003189_15_45
Type: pfam
Location: 44390 - 45784 (-)
Type: pfam
Location: 44390 - 45784 (-)
Gene ID: MGYG000003189_15_46
Type: TC
Location: 45900 - 46421 (-)
Type: TC
Location: 45900 - 46421 (-)
Gene ID: MGYG000003189_15_47
Type: TC
Location: 46450 - 48354 (-)
Type: TC
Location: 46450 - 48354 (-)
Gene ID: MGYG000003189_15_48
Type: CAZyme
Location: 48574 - 50973 (-)
Type: CAZyme
Location: 48574 - 50973 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_O
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003189_15_45 | vegetarian > vegan | 1.61389 | 0.02445 |
| MGYG000003189_15_47 | vegetarian > vegan | 1.04883 | 0.02615 |