Cluster: MGYG000003187_CGC8
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003187
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003187_1 | MGYG000003187_1_350 | 391286 | 392707 | - | 2.A.1.3.51 |
| pfam | MGYG000003187_1 | MGYG000003187_1_351 | 393099 | 393350 | + | DUF2766 |
| TC | MGYG000003187_1 | MGYG000003187_1_352 | 393431 | 394774 | - | 2.A.13.1.2 |
| pfam | MGYG000003187_1 | MGYG000003187_1_353 | 394945 | 395448 | - | Ferritin |
| peptidase | MGYG000003187_1 | MGYG000003187_1_354 | 395995 | 396552 | + | C56.UNW |
| TC | MGYG000003187_1 | MGYG000003187_1_355 | 396867 | 397856 | + | 3.A.1.2.2 |
| TC | MGYG000003187_1 | MGYG000003187_1_356 | 397926 | 399440 | + | 3.A.1.2.2 |
| TC | MGYG000003187_1 | MGYG000003187_1_357 | 399455 | 400435 | + | 3.A.1.2.2 |
| pfam | MGYG000003187_1 | MGYG000003187_1_358 | 400611 | 401417 | + | Trehalose_PPase |
| CAZyme | MGYG000003187_1 | MGYG000003187_1_359 | 401392 | 402816 | + | GT20 |
Gene ID: MGYG000003187_1_350
Type: TC
Location: 391286 - 392707 (-)
Type: TC
Location: 391286 - 392707 (-)
Gene ID: MGYG000003187_1_351
Type: pfam
Location: 393099 - 393350 (+)
Type: pfam
Location: 393099 - 393350 (+)
Gene ID: MGYG000003187_1_352
Type: TC
Location: 393431 - 394774 (-)
Type: TC
Location: 393431 - 394774 (-)
Gene ID: MGYG000003187_1_353
Type: pfam
Location: 394945 - 395448 (-)
Type: pfam
Location: 394945 - 395448 (-)
Gene ID: MGYG000003187_1_354
Type: peptidase
Location: 395995 - 396552 (+)
Type: peptidase
Location: 395995 - 396552 (+)
Gene ID: MGYG000003187_1_355
Type: TC
Location: 396867 - 397856 (+)
Type: TC
Location: 396867 - 397856 (+)
Gene ID: MGYG000003187_1_356
Type: TC
Location: 397926 - 399440 (+)
Type: TC
Location: 397926 - 399440 (+)
Gene ID: MGYG000003187_1_357
Type: TC
Location: 399455 - 400435 (+)
Type: TC
Location: 399455 - 400435 (+)
Gene ID: MGYG000003187_1_358
Type: pfam
Location: 400611 - 401417 (+)
Type: pfam
Location: 400611 - 401417 (+)
Gene ID: MGYG000003187_1_359
Type: CAZyme
Location: 401392 - 402816 (+)
Type: CAZyme
Location: 401392 - 402816 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Leclercia
Species
Leclercia adecarboxylata_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.