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Cluster: MGYG000003187_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003187_15 MGYG000003187_15_23 25395 27944 - 1.C.75.1.2
pfam MGYG000003187_15 MGYG000003187_15_24 28237 29166 - FdhE_N | FdhE_central | FdhE_C
TC MGYG000003187_15 MGYG000003187_15_25 29163 29798 - 5.A.3.2.1
TC MGYG000003187_15 MGYG000003187_15_26 29795 30697 - 5.A.3.2.1
TC MGYG000003187_15 MGYG000003187_15_27 30710 33124 - 5.A.3.2.1
TC MGYG000003187_15 MGYG000003187_15_28 33173 33760 - 5.A.3.2.1
pfam MGYG000003187_15 MGYG000003187_15_29 34199 35029 + FdhD-NarQ
pfam MGYG000003187_15 MGYG000003187_15_30 35144 35356 + YdgH_BhsA-like
TC MGYG000003187_15 MGYG000003187_15_31 35398 35721 - 2.A.78.2.3
TC MGYG000003187_15 MGYG000003187_15_32 35721 36380 - 2.A.78.2.3
TF MGYG000003187_15 MGYG000003187_15_33 36483 37031 + HTH_3
TF MGYG000003187_15 MGYG000003187_15_34 37053 38048 + LacI
CAZyme MGYG000003187_15 MGYG000003187_15_35 38153 40276 + GH36
TC MGYG000003187_15 MGYG000003187_15_36 40321 41595 + 2.A.1.5.4
pfam MGYG000003187_15 MGYG000003187_15_37 41583 41897 - rhaM
pfam MGYG000003187_15 MGYG000003187_15_38 41894 43042 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC MGYG000003187_15 MGYG000003187_15_39 43114 44118 - 3.A.1.2.8
TC MGYG000003187_15 MGYG000003187_15_40 44115 45119 - 3.A.1.2.9
TC MGYG000003187_15 MGYG000003187_15_41 45119 46621 - 3.A.1.2.9
TC MGYG000003187_15 MGYG000003187_15_42 46677 47663 - 3.A.1.2.9
Gene ID: MGYG000003187_15_23
Type: TC
Location: 25395 - 27944 (-)
Gene ID: MGYG000003187_15_24
Type: pfam
Location: 28237 - 29166 (-)
Gene ID: MGYG000003187_15_25
Type: TC
Location: 29163 - 29798 (-)
Gene ID: MGYG000003187_15_26
Type: TC
Location: 29795 - 30697 (-)
Gene ID: MGYG000003187_15_27
Type: TC
Location: 30710 - 33124 (-)
Gene ID: MGYG000003187_15_28
Type: TC
Location: 33173 - 33760 (-)
Gene ID: MGYG000003187_15_29
Type: pfam
Location: 34199 - 35029 (+)
Gene ID: MGYG000003187_15_30
Type: pfam
Location: 35144 - 35356 (+)
Gene ID: MGYG000003187_15_31
Type: TC
Location: 35398 - 35721 (-)
Gene ID: MGYG000003187_15_32
Type: TC
Location: 35721 - 36380 (-)
Gene ID: MGYG000003187_15_33
Type: TF
Location: 36483 - 37031 (+)
Gene ID: MGYG000003187_15_34
Type: TF
Location: 37053 - 38048 (+)
Gene ID: MGYG000003187_15_35
Type: CAZyme
Location: 38153 - 40276 (+)
Gene ID: MGYG000003187_15_36
Type: TC
Location: 40321 - 41595 (+)
Gene ID: MGYG000003187_15_37
Type: pfam
Location: 41583 - 41897 (-)
Gene ID: MGYG000003187_15_38
Type: pfam
Location: 41894 - 43042 (-)
Gene ID: MGYG000003187_15_39
Type: TC
Location: 43114 - 44118 (-)
Gene ID: MGYG000003187_15_40
Type: TC
Location: 44115 - 45119 (-)
Gene ID: MGYG000003187_15_41
Type: TC
Location: 45119 - 46621 (-)
Gene ID: MGYG000003187_15_42
Type: TC
Location: 46677 - 47663 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003187_15_31 vegan > omnivore 2.36166 0.03496
MGYG000003187_15_31 vegetarian > omnivore 2.65607 0.03400
MGYG000003187_15_33 vegetarian > vegan 1.19387 0.03778
MGYG000003187_15_34 vegetarian > omnivore 1.33711 0.03400
MGYG000003187_15_34 vegetarian > vegan 1.81467 0.03778
MGYG000003187_15_35 vegan > omnivore 2.19589 0.04702
MGYG000003187_15_35 vegetarian > omnivore 2.04803 0.03400
MGYG000003187_15_36 vegetarian > vegan 1.26143 0.03778
MGYG000003187_15_36 vegetarian > omnivore 1.52841 0.03400
MGYG000003187_15_37 vegetarian > vegan 1.45862 0.03778
MGYG000003187_15_38 vegetarian > vegan 1.21056 0.03778
MGYG000003187_15_39 vegetarian > vegan 1.59967 0.03778
MGYG000003187_15_40 vegetarian > omnivore 1.10727 0.03400
MGYG000003187_15_42 vegetarian > omnivore 1.47889 0.03400

🧭 Explore Read Mapping of CGC

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