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Cluster: MGYG000003187_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003187_1 MGYG000003187_1_233 269361 270584 + GT4
pfam MGYG000003187_1 MGYG000003187_1_234 270588 272024 + NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
pfam MGYG000003187_1 MGYG000003187_1_235 272176 273546 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC MGYG000003187_1 MGYG000003187_1_236 273596 274990 + 9.B.18.1.1
TC MGYG000003187_1 MGYG000003187_1_237 274992 276470 + 2.A.66.2.7
pfam MGYG000003187_1 MGYG000003187_1_238 276522 277802 + PS_pyruv_trans
CAZyme MGYG000003187_1 MGYG000003187_1_239 277799 279019 + GT4
Gene ID: MGYG000003187_1_233
Type: CAZyme
Location: 269361 - 270584 (+)
Gene ID: MGYG000003187_1_234
Type: pfam
Location: 270588 - 272024 (+)
Gene ID: MGYG000003187_1_235
Type: pfam
Location: 272176 - 273546 (+)
Gene ID: MGYG000003187_1_236
Type: TC
Location: 273596 - 274990 (+)
Gene ID: MGYG000003187_1_237
Type: TC
Location: 274992 - 276470 (+)
Gene ID: MGYG000003187_1_238
Type: pfam
Location: 276522 - 277802 (+)
Gene ID: MGYG000003187_1_239
Type: CAZyme
Location: 277799 - 279019 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003187_1_238 vegetarian > vegan 1.04508 0.03768

🧭 Explore Read Mapping of CGC

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