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Cluster: MGYG000003187_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003187_10 MGYG000003187_10_88 93169 93588 + 3.D.1.9.2
TC MGYG000003187_10 MGYG000003187_10_89 93637 95316 + 3.D.1.9.2
pfam MGYG000003187_10 MGYG000003187_10_90 95641 95793 + HOK_GEF
pfam MGYG000003187_10 MGYG000003187_10_91 95911 96585 + Sel1 | Sel1 | Sel1
TC MGYG000003187_10 MGYG000003187_10_92 96671 97984 - 2.A.23.1.1
TC MGYG000003187_10 MGYG000003187_10_93 98405 100363 + 4.C.1.1.6
TC MGYG000003187_10 MGYG000003187_10_94 100445 100759 + 9.B.136.1.1
TC MGYG000003187_10 MGYG000003187_10_95 100756 102405 + 2.A.21.7.2
NULL(UNKNOWN) MGYG000003187_10 MGYG000003187_10_96 102616 104193 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003187_10 MGYG000003187_10_97 104241 105536 + GH177
TC MGYG000003187_10 MGYG000003187_10_98 105635 106909 + 3.A.1.1.11
TC MGYG000003187_10 MGYG000003187_10_99 106986 107675 - 2.A.122.1.6
TC MGYG000003187_10 MGYG000003187_10_100 107668 108078 - 1.E.14.1.9
TF MGYG000003187_10 MGYG000003187_10_101 108180 109067 + HTH_1
TC MGYG000003187_10 MGYG000003187_10_102 109146 110792 - 2.A.36.3.1
TC MGYG000003187_10 MGYG000003187_10_103 110944 112293 - 2.A.40.7.5
Gene ID: MGYG000003187_10_88
Type: TC
Location: 93169 - 93588 (+)
Gene ID: MGYG000003187_10_89
Type: TC
Location: 93637 - 95316 (+)
Gene ID: MGYG000003187_10_90
Type: pfam
Location: 95641 - 95793 (+)
Gene ID: MGYG000003187_10_91
Type: pfam
Location: 95911 - 96585 (+)
Gene ID: MGYG000003187_10_92
Type: TC
Location: 96671 - 97984 (-)
Gene ID: MGYG000003187_10_93
Type: TC
Location: 98405 - 100363 (+)
Gene ID: MGYG000003187_10_94
Type: TC
Location: 100445 - 100759 (+)
Gene ID: MGYG000003187_10_95
Type: TC
Location: 100756 - 102405 (+)
Gene ID: MGYG000003187_10_96
Type:
Location: 102616 - 104193 (-)
Gene ID: MGYG000003187_10_97
Type: CAZyme
Location: 104241 - 105536 (+)
Gene ID: MGYG000003187_10_98
Type: TC
Location: 105635 - 106909 (+)
Gene ID: MGYG000003187_10_99
Type: TC
Location: 106986 - 107675 (-)
Gene ID: MGYG000003187_10_100
Type: TC
Location: 107668 - 108078 (-)
Gene ID: MGYG000003187_10_101
Type: TF
Location: 108180 - 109067 (+)
Gene ID: MGYG000003187_10_102
Type: TC
Location: 109146 - 110792 (-)
Gene ID: MGYG000003187_10_103
Type: TC
Location: 110944 - 112293 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003187_10_88 vegetarian > omnivore 1.15263 0.03400
MGYG000003187_10_99 vegetarian > omnivore 1.63867 0.03400
MGYG000003187_10_100 vegetarian > omnivore 1.45418 0.03400
MGYG000003187_10_100 vegetarian > vegan 1.01751 0.03778

🧭 Explore Read Mapping of CGC

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