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Cluster: MGYG000003187_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003187_1 MGYG000003187_1_210 237355 238770 - 2.A.1.3.26
TC MGYG000003187_1 MGYG000003187_1_211 238770 241847 - 2.A.6.2.12
TC MGYG000003187_1 MGYG000003187_1_212 241848 244973 - 2.A.6.2.12
TC MGYG000003187_1 MGYG000003187_1_213 244973 246205 - 8.A.1.6.2
pfam MGYG000003187_1 MGYG000003187_1_214 246432 247784 - HSP70
STP MGYG000003187_1 MGYG000003187_1_215 247918 248784 + AlkA_N | HhH-GPD
TC MGYG000003187_1 MGYG000003187_1_216 248755 252084 - 9.B.34.1.1
pfam MGYG000003187_1 MGYG000003187_1_217 252429 253070 + PRK
pfam MGYG000003187_1 MGYG000003187_1_218 253162 253743 + DCD_N | DCD
TC MGYG000003187_1 MGYG000003187_1_219 253771 255618 + 9.B.22.2.1
TC MGYG000003187_1 MGYG000003187_1_220 255665 257248 - 2.A.109.2.3
TC MGYG000003187_1 MGYG000003187_1_221 257939 259075 + 1.B.18.3.1
pfam MGYG000003187_1 MGYG000003187_1_222 259081 259524 + LMWPc
TC MGYG000003187_1 MGYG000003187_1_223 259527 261689 + 8.A.3.3.2
CAZyme MGYG000003187_1 MGYG000003187_1_224 261689 262549 + GT2
pfam MGYG000003187_1 MGYG000003187_1_225 262549 263040 + Hexapep
CAZyme MGYG000003187_1 MGYG000003187_1_226 263037 264254 + GT4
NULL(UNKNOWN) MGYG000003187_1 MGYG000003187_1_227 264229 265449 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003187_1 MGYG000003187_1_228 265461 266207 + GT2
Gene ID: MGYG000003187_1_210
Type: TC
Location: 237355 - 238770 (-)
Gene ID: MGYG000003187_1_211
Type: TC
Location: 238770 - 241847 (-)
Gene ID: MGYG000003187_1_212
Type: TC
Location: 241848 - 244973 (-)
Gene ID: MGYG000003187_1_213
Type: TC
Location: 244973 - 246205 (-)
Gene ID: MGYG000003187_1_214
Type: pfam
Location: 246432 - 247784 (-)
Gene ID: MGYG000003187_1_215
Type: STP
Location: 247918 - 248784 (+)
Gene ID: MGYG000003187_1_216
Type: TC
Location: 248755 - 252084 (-)
Gene ID: MGYG000003187_1_217
Type: pfam
Location: 252429 - 253070 (+)
Gene ID: MGYG000003187_1_218
Type: pfam
Location: 253162 - 253743 (+)
Gene ID: MGYG000003187_1_219
Type: TC
Location: 253771 - 255618 (+)
Gene ID: MGYG000003187_1_220
Type: TC
Location: 255665 - 257248 (-)
Gene ID: MGYG000003187_1_221
Type: TC
Location: 257939 - 259075 (+)
Gene ID: MGYG000003187_1_222
Type: pfam
Location: 259081 - 259524 (+)
Gene ID: MGYG000003187_1_223
Type: TC
Location: 259527 - 261689 (+)
Gene ID: MGYG000003187_1_224
Type: CAZyme
Location: 261689 - 262549 (+)
Gene ID: MGYG000003187_1_225
Type: pfam
Location: 262549 - 263040 (+)
Gene ID: MGYG000003187_1_226
Type: CAZyme
Location: 263037 - 264254 (+)
Gene ID: MGYG000003187_1_227
Type:
Location: 264229 - 265449 (+)
Gene ID: MGYG000003187_1_228
Type: CAZyme
Location: 265461 - 266207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003187_1_228 vegetarian > omnivore 1.27269 0.03400

🧭 Explore Read Mapping of CGC

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