Cluster: MGYG000003187_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003187
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003187_4 | MGYG000003187_4_108 | 106489 | 107442 | + | GH73 |
| pfam | MGYG000003187_4 | MGYG000003187_4_109 | 107519 | 109165 | + | Flg_bb_rod | Flg_bbr_C | flgK_1st_1 | FlgK_D1 |
| pfam | MGYG000003187_4 | MGYG000003187_4_110 | 109180 | 110133 | + | Flagellin_N |
| TC | MGYG000003187_4 | MGYG000003187_4_111 | 110214 | 111428 | - | 2.A.1.36.3 |
Gene ID: MGYG000003187_4_108
Type: CAZyme
Location: 106489 - 107442 (+)
Type: CAZyme
Location: 106489 - 107442 (+)
Gene ID: MGYG000003187_4_109
Type: pfam
Location: 107519 - 109165 (+)
Type: pfam
Location: 107519 - 109165 (+)
Gene ID: MGYG000003187_4_110
Type: pfam
Location: 109180 - 110133 (+)
Type: pfam
Location: 109180 - 110133 (+)
Gene ID: MGYG000003187_4_111
Type: TC
Location: 110214 - 111428 (-)
Type: TC
Location: 110214 - 111428 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Leclercia
Species
Leclercia adecarboxylata_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.