Cluster: MGYG000003187_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003187
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003187_4 | MGYG000003187_4_78 | 80774 | 83302 | + | GT2 |
| pfam | MGYG000003187_4 | MGYG000003187_4_79 | 83402 | 83629 | + | DUF1375 |
| pfam | MGYG000003187_4 | MGYG000003187_4_80 | 83630 | 84004 | - | MsyB |
| TC | MGYG000003187_4 | MGYG000003187_4_81 | 84103 | 85311 | - | 2.A.1.2.20 |
Gene ID: MGYG000003187_4_78
Type: CAZyme
Location: 80774 - 83302 (+)
Type: CAZyme
Location: 80774 - 83302 (+)
Gene ID: MGYG000003187_4_79
Type: pfam
Location: 83402 - 83629 (+)
Type: pfam
Location: 83402 - 83629 (+)
Gene ID: MGYG000003187_4_80
Type: pfam
Location: 83630 - 84004 (-)
Type: pfam
Location: 83630 - 84004 (-)
Gene ID: MGYG000003187_4_81
Type: TC
Location: 84103 - 85311 (-)
Type: TC
Location: 84103 - 85311 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Leclercia
Species
Leclercia adecarboxylata_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003187_4_80 | vegetarian > omnivore | 1.86976 | 0.03400 |