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Cluster: MGYG000003187_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003187_3 MGYG000003187_3_334 362780 363976 - 3.A.15.2.1
TC MGYG000003187_3 MGYG000003187_3_335 363966 365351 - 3.A.15.2.1
TC MGYG000003187_3 MGYG000003187_3_336 365348 365800 - 3.A.15.2.1
pfam MGYG000003187_3 MGYG000003187_3_337 365985 366878 - QRPTase_C | QRPTase_N
pfam MGYG000003187_3 MGYG000003187_3_338 366966 367529 + Amidase_2
TC MGYG000003187_3 MGYG000003187_3_339 367526 368380 + 9.B.125.1.1
CAZyme MGYG000003187_3 MGYG000003187_3_340 368399 369349 - GH43_26
TC MGYG000003187_3 MGYG000003187_3_341 369473 370882 - 2.A.2.3.4
TC MGYG000003187_3 MGYG000003187_3_342 371044 372414 - 2.A.3.1.3
Gene ID: MGYG000003187_3_334
Type: TC
Location: 362780 - 363976 (-)
Gene ID: MGYG000003187_3_335
Type: TC
Location: 363966 - 365351 (-)
Gene ID: MGYG000003187_3_336
Type: TC
Location: 365348 - 365800 (-)
Gene ID: MGYG000003187_3_337
Type: pfam
Location: 365985 - 366878 (-)
Gene ID: MGYG000003187_3_338
Type: pfam
Location: 366966 - 367529 (+)
Gene ID: MGYG000003187_3_339
Type: TC
Location: 367526 - 368380 (+)
Gene ID: MGYG000003187_3_340
Type: CAZyme
Location: 368399 - 369349 (-)
Gene ID: MGYG000003187_3_341
Type: TC
Location: 369473 - 370882 (-)
Gene ID: MGYG000003187_3_342
Type: TC
Location: 371044 - 372414 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003187_3_340 vegan > omnivore 1.94639 0.03496
MGYG000003187_3_340 vegetarian > omnivore 2.42261 0.02045

🧭 Explore Read Mapping of CGC

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