Cluster: MGYG000003187_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003187
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003187_1 | MGYG000003187_1_154 | 174896 | 176758 | + | 4.A.1.2.2 |
| CAZyme | MGYG000003187_1 | MGYG000003187_1_155 | 176771 | 178165 | + | GH1 |
| TC | MGYG000003187_1 | MGYG000003187_1_156 | 178309 | 179727 | + | 1.B.17.3.10 |
| sulfatase | MGYG000003187_1 | MGYG000003187_1_157 | 179777 | 180550 | + | S1_4 |
| TC | MGYG000003187_1 | MGYG000003187_1_158 | 180552 | 181112 | - | 9.B.27.2.7 |
| TC | MGYG000003187_1 | MGYG000003187_1_159 | 181267 | 181854 | + | 9.B.29.3.1 |
Gene ID: MGYG000003187_1_154
Type: TC
Location: 174896 - 176758 (+)
Type: TC
Location: 174896 - 176758 (+)
Gene ID: MGYG000003187_1_155
Type: CAZyme
Location: 176771 - 178165 (+)
Type: CAZyme
Location: 176771 - 178165 (+)
Gene ID: MGYG000003187_1_156
Type: TC
Location: 178309 - 179727 (+)
Type: TC
Location: 178309 - 179727 (+)
Gene ID: MGYG000003187_1_157
Type: sulfatase
Location: 179777 - 180550 (+)
Type: sulfatase
Location: 179777 - 180550 (+)
Gene ID: MGYG000003187_1_158
Type: TC
Location: 180552 - 181112 (-)
Type: TC
Location: 180552 - 181112 (-)
Gene ID: MGYG000003187_1_159
Type: TC
Location: 181267 - 181854 (+)
Type: TC
Location: 181267 - 181854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Leclercia
Species
Leclercia adecarboxylata_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003187_1_157 | vegetarian > omnivore | 1.48947 | 0.03400 |