Cluster: MGYG000003187_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003187
- CGC Family ID: CGCFAM_00433
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003187_3 | MGYG000003187_3_81 | 81541 | 83196 | - | GH13_29 |
| TC | MGYG000003187_3 | MGYG000003187_3_82 | 83245 | 84663 | - | 4.A.1.2.4 |
| TF | MGYG000003187_3 | MGYG000003187_3_83 | 84789 | 85736 | - | LacI |
| TC | MGYG000003187_3 | MGYG000003187_3_84 | 86127 | 88829 | + | 3.A.3.4.1 |
| CAZyme | MGYG000003187_3 | MGYG000003187_3_85 | 88984 | 91368 | + | GH20 |
| CAZyme | MGYG000003187_3 | MGYG000003187_3_86 | 91495 | 92955 | - | AA10 |
Gene ID: MGYG000003187_3_81
Type: CAZyme
Location: 81541 - 83196 (-)
Type: CAZyme
Location: 81541 - 83196 (-)
Gene ID: MGYG000003187_3_82
Type: TC
Location: 83245 - 84663 (-)
Type: TC
Location: 83245 - 84663 (-)
Gene ID: MGYG000003187_3_83
Type: TF
Location: 84789 - 85736 (-)
Type: TF
Location: 84789 - 85736 (-)
Gene ID: MGYG000003187_3_84
Type: TC
Location: 86127 - 88829 (+)
Type: TC
Location: 86127 - 88829 (+)
Gene ID: MGYG000003187_3_85
Type: CAZyme
Location: 88984 - 91368 (+)
Type: CAZyme
Location: 88984 - 91368 (+)
Gene ID: MGYG000003187_3_86
Type: CAZyme
Location: 91495 - 92955 (-)
Type: CAZyme
Location: 91495 - 92955 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Leclercia
Species
Leclercia adecarboxylata_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003187_3_83 | vegetarian > vegan | 1.39473 | 0.03778 |