Cluster: MGYG000003187_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003187
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003187_2 | MGYG000003187_2_401 | 420095 | 421243 | - | CE9 |
| pfam | MGYG000003187_2 | MGYG000003187_2_402 | 421300 | 422100 | - | Glucosamine_iso |
| TC | MGYG000003187_2 | MGYG000003187_2_403 | 422467 | 424446 | + | 4.A.1.1.2 |
| pfam | MGYG000003187_2 | MGYG000003187_2_404 | 424626 | 426293 | + | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| TC | MGYG000003187_2 | MGYG000003187_2_405 | 426728 | 428134 | + | 1.B.25.1.13 |
Gene ID: MGYG000003187_2_401
Type: CAZyme
Location: 420095 - 421243 (-)
Type: CAZyme
Location: 420095 - 421243 (-)
Gene ID: MGYG000003187_2_402
Type: pfam
Location: 421300 - 422100 (-)
Type: pfam
Location: 421300 - 422100 (-)
Gene ID: MGYG000003187_2_403
Type: TC
Location: 422467 - 424446 (+)
Type: TC
Location: 422467 - 424446 (+)
Gene ID: MGYG000003187_2_404
Type: pfam
Location: 424626 - 426293 (+)
Type: pfam
Location: 424626 - 426293 (+)
Gene ID: MGYG000003187_2_405
Type: TC
Location: 426728 - 428134 (+)
Type: TC
Location: 426728 - 428134 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Leclercia
Species
Leclercia adecarboxylata_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.