Cluster: MGYG000003187_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003187
- CGC Family ID: CGCFAM_00471
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003187_2 | MGYG000003187_2_3 | 2228 | 3403 | + | 2.A.1.2.65 |
| pfam | MGYG000003187_2 | MGYG000003187_2_4 | 3543 | 4343 | + | Exo_endo_phos |
| pfam | MGYG000003187_2 | MGYG000003187_2_5 | 4422 | 5192 | + | Ubie_methyltran | Methyltransf_29 | TehB | Methyltransf_8 | MTS | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | MGYG000003187_2 | MGYG000003187_2_6 | 5246 | 6430 | - | GH23 |
Gene ID: MGYG000003187_2_3
Type: TC
Location: 2228 - 3403 (+)
Type: TC
Location: 2228 - 3403 (+)
Gene ID: MGYG000003187_2_4
Type: pfam
Location: 3543 - 4343 (+)
Type: pfam
Location: 3543 - 4343 (+)
Gene ID: MGYG000003187_2_5
Type: pfam
Location: 4422 - 5192 (+)
Type: pfam
Location: 4422 - 5192 (+)
Gene ID: MGYG000003187_2_6
Type: CAZyme
Location: 5246 - 6430 (-)
Type: CAZyme
Location: 5246 - 6430 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Leclercia
Species
Leclercia adecarboxylata_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.