Cluster: MGYG000003186_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003186
- CGC Family ID: CGCFAM_10929
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003186_1 | MGYG000003186_1_333 | 386226 | 389615 | - | GT2 |
| TF | MGYG000003186_1 | MGYG000003186_1_334 | 389625 | 389906 | - | Whib |
| NULL(UNKNOWN) | MGYG000003186_1 | MGYG000003186_1_335 | 390149 | 390793 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003186_1 | MGYG000003186_1_336 | 390861 | 391757 | - | GT2 |
| CAZyme | MGYG000003186_1 | MGYG000003186_1_337 | 391754 | 393409 | - | GT4 |
| TC | MGYG000003186_1 | MGYG000003186_1_338 | 393396 | 394157 | - | 3.A.1.103.5 |
| TC | MGYG000003186_1 | MGYG000003186_1_339 | 394157 | 395020 | - | 3.A.1.103.1 |
| pfam | MGYG000003186_1 | MGYG000003186_1_340 | 395029 | 396195 | - | FAD_binding_2 | DAO | Amino_oxidase | Thi4 | GLF | NAD_binding_8 |
| CAZyme | MGYG000003186_1 | MGYG000003186_1_341 | 396236 | 398032 | - | GT2 | GT2 |
| pfam | MGYG000003186_1 | MGYG000003186_1_342 | 398066 | 400087 | - | DUF6541 |
| pfam | MGYG000003186_1 | MGYG000003186_1_343 | 400091 | 401389 | - | UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | MGYG000003186_1 | MGYG000003186_1_344 | 401669 | 403813 | + | 9.B.97.5.1 |
Gene ID: MGYG000003186_1_333
Type: CAZyme
Location: 386226 - 389615 (-)
Type: CAZyme
Location: 386226 - 389615 (-)
Gene ID: MGYG000003186_1_334
Type: TF
Location: 389625 - 389906 (-)
Type: TF
Location: 389625 - 389906 (-)
Gene ID: MGYG000003186_1_335
Type:
Location: 390149 - 390793 (+)
Type:
Location: 390149 - 390793 (+)
Gene ID: MGYG000003186_1_336
Type: CAZyme
Location: 390861 - 391757 (-)
Type: CAZyme
Location: 390861 - 391757 (-)
Gene ID: MGYG000003186_1_337
Type: CAZyme
Location: 391754 - 393409 (-)
Type: CAZyme
Location: 391754 - 393409 (-)
Gene ID: MGYG000003186_1_338
Type: TC
Location: 393396 - 394157 (-)
Type: TC
Location: 393396 - 394157 (-)
Gene ID: MGYG000003186_1_339
Type: TC
Location: 394157 - 395020 (-)
Type: TC
Location: 394157 - 395020 (-)
Gene ID: MGYG000003186_1_340
Type: pfam
Location: 395029 - 396195 (-)
Type: pfam
Location: 395029 - 396195 (-)
Gene ID: MGYG000003186_1_341
Type: CAZyme
Location: 396236 - 398032 (-)
Type: CAZyme
Location: 396236 - 398032 (-)
Gene ID: MGYG000003186_1_342
Type: pfam
Location: 398066 - 400087 (-)
Type: pfam
Location: 398066 - 400087 (-)
Gene ID: MGYG000003186_1_343
Type: pfam
Location: 400091 - 401389 (-)
Type: pfam
Location: 400091 - 401389 (-)
Gene ID: MGYG000003186_1_344
Type: TC
Location: 401669 - 403813 (+)
Type: TC
Location: 401669 - 403813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Gleimia
Species
Gleimia europaea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.