Cluster: MGYG000003186_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003186
- CGC Family ID: CGCFAM_00711
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003186_3 | MGYG000003186_3_45 | 52377 | 54116 | - | GH13_10 |
| CAZyme | MGYG000003186_3 | MGYG000003186_3_46 | 54120 | 56621 | - | GH13_26 |
| CAZyme | MGYG000003186_3 | MGYG000003186_3_47 | 56614 | 58731 | - | CBM48 | GH13_11 |
| TC | MGYG000003186_3 | MGYG000003186_3_48 | 58833 | 59927 | - | 3.A.1.11.2 |
| NULL(UNKNOWN) | MGYG000003186_3 | MGYG000003186_3_49 | 59924 | 61531 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000003186_3 | MGYG000003186_3_50 | 61528 | 62592 | - | SBP_bac_1 |
| TC | MGYG000003186_3 | MGYG000003186_3_51 | 62605 | 63984 | - | 2.A.1.4.3 |
Gene ID: MGYG000003186_3_45
Type: CAZyme
Location: 52377 - 54116 (-)
Type: CAZyme
Location: 52377 - 54116 (-)
Gene ID: MGYG000003186_3_46
Type: CAZyme
Location: 54120 - 56621 (-)
Type: CAZyme
Location: 54120 - 56621 (-)
Gene ID: MGYG000003186_3_47
Type: CAZyme
Location: 56614 - 58731 (-)
Type: CAZyme
Location: 56614 - 58731 (-)
Gene ID: MGYG000003186_3_48
Type: TC
Location: 58833 - 59927 (-)
Type: TC
Location: 58833 - 59927 (-)
Gene ID: MGYG000003186_3_49
Type:
Location: 59924 - 61531 (-)
Type:
Location: 59924 - 61531 (-)
Gene ID: MGYG000003186_3_50
Type: STP
Location: 61528 - 62592 (-)
Type: STP
Location: 61528 - 62592 (-)
Gene ID: MGYG000003186_3_51
Type: TC
Location: 62605 - 63984 (-)
Type: TC
Location: 62605 - 63984 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Gleimia
Species
Gleimia europaea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.