Cluster: MGYG000003186_CGC17
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003186
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003186_1 | MGYG000003186_1_1061 | 1190785 | 1191438 | + | 9.B.104.3.3 |
| pfam | MGYG000003186_1 | MGYG000003186_1_1062 | 1191498 | 1192469 | + | SpoU_methylase | SpoU_sub_bind |
| TC | MGYG000003186_1 | MGYG000003186_1_1063 | 1192498 | 1193334 | - | 3.A.1.29.1 |
| TC | MGYG000003186_1 | MGYG000003186_1_1064 | 1193337 | 1195295 | - | 3.A.1.29.1 |
| TC | MGYG000003186_1 | MGYG000003186_1_1065 | 1195303 | 1195857 | - | 3.A.1.29.1 |
| pfam | MGYG000003186_1 | MGYG000003186_1_1066 | 1195902 | 1196759 | - | SAM_HAT_N | SAM_HAT_C |
| TC | MGYG000003186_1 | MGYG000003186_1_1067 | 1197039 | 1198529 | + | 2.A.21.2.4 |
| pfam | MGYG000003186_1 | MGYG000003186_1_1068 | 1198728 | 1202324 | + | Aldedh | Pro_dh |
| CAZyme | MGYG000003186_1 | MGYG000003186_1_1069 | 1202408 | 1204096 | - | GH13_30 |
| TF | MGYG000003186_1 | MGYG000003186_1_1070 | 1204119 | 1205141 | - | LacI |
| TC | MGYG000003186_1 | MGYG000003186_1_1071 | 1205431 | 1206654 | + | 3.A.1.1.22 |
| TC | MGYG000003186_1 | MGYG000003186_1_1072 | 1206721 | 1208340 | + | 3.A.1.1.1 |
| TC | MGYG000003186_1 | MGYG000003186_1_1073 | 1208340 | 1209245 | + | 3.A.1.1.2 |
Gene ID: MGYG000003186_1_1061
Type: TC
Location: 1190785 - 1191438 (+)
Type: TC
Location: 1190785 - 1191438 (+)
Gene ID: MGYG000003186_1_1062
Type: pfam
Location: 1191498 - 1192469 (+)
Type: pfam
Location: 1191498 - 1192469 (+)
Gene ID: MGYG000003186_1_1063
Type: TC
Location: 1192498 - 1193334 (-)
Type: TC
Location: 1192498 - 1193334 (-)
Gene ID: MGYG000003186_1_1064
Type: TC
Location: 1193337 - 1195295 (-)
Type: TC
Location: 1193337 - 1195295 (-)
Gene ID: MGYG000003186_1_1065
Type: TC
Location: 1195303 - 1195857 (-)
Type: TC
Location: 1195303 - 1195857 (-)
Gene ID: MGYG000003186_1_1066
Type: pfam
Location: 1195902 - 1196759 (-)
Type: pfam
Location: 1195902 - 1196759 (-)
Gene ID: MGYG000003186_1_1067
Type: TC
Location: 1197039 - 1198529 (+)
Type: TC
Location: 1197039 - 1198529 (+)
Gene ID: MGYG000003186_1_1068
Type: pfam
Location: 1198728 - 1202324 (+)
Type: pfam
Location: 1198728 - 1202324 (+)
Gene ID: MGYG000003186_1_1069
Type: CAZyme
Location: 1202408 - 1204096 (-)
Type: CAZyme
Location: 1202408 - 1204096 (-)
Gene ID: MGYG000003186_1_1070
Type: TF
Location: 1204119 - 1205141 (-)
Type: TF
Location: 1204119 - 1205141 (-)
Gene ID: MGYG000003186_1_1071
Type: TC
Location: 1205431 - 1206654 (+)
Type: TC
Location: 1205431 - 1206654 (+)
Gene ID: MGYG000003186_1_1072
Type: TC
Location: 1206721 - 1208340 (+)
Type: TC
Location: 1206721 - 1208340 (+)
Gene ID: MGYG000003186_1_1073
Type: TC
Location: 1208340 - 1209245 (+)
Type: TC
Location: 1208340 - 1209245 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Gleimia
Species
Gleimia europaea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.