Cluster: MGYG000003186_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003186
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003186_1 | MGYG000003186_1_969 | 1101246 | 1102763 | + | 2.A.1.3.17 |
| pfam | MGYG000003186_1 | MGYG000003186_1_970 | 1102841 | 1103752 | - | tRNA-synt_1c |
| NULL(UNKNOWN) | MGYG000003186_1 | MGYG000003186_1_971 | 1103792 | 1104553 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003186_1 | MGYG000003186_1_972 | 1104635 | 1105036 | + | 1.A.43.1.11 |
| pfam | MGYG000003186_1 | MGYG000003186_1_973 | 1105033 | 1105446 | + | CRCB |
| TC | MGYG000003186_1 | MGYG000003186_1_974 | 1105548 | 1106549 | + | 3.A.1.24.2 |
| TC | MGYG000003186_1 | MGYG000003186_1_975 | 1106546 | 1107250 | + | 3.A.1.24.5 |
| TC | MGYG000003186_1 | MGYG000003186_1_976 | 1107351 | 1108187 | + | 3.A.1.24.5 |
| STP | MGYG000003186_1 | MGYG000003186_1_977 | 1108273 | 1108911 | - | Pribosyltran |
| pfam | MGYG000003186_1 | MGYG000003186_1_978 | 1108993 | 1109631 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | MGYG000003186_1 | MGYG000003186_1_979 | 1110153 | 1112513 | + | GT35 |
Gene ID: MGYG000003186_1_969
Type: TC
Location: 1101246 - 1102763 (+)
Type: TC
Location: 1101246 - 1102763 (+)
Gene ID: MGYG000003186_1_970
Type: pfam
Location: 1102841 - 1103752 (-)
Type: pfam
Location: 1102841 - 1103752 (-)
Gene ID: MGYG000003186_1_971
Type:
Location: 1103792 - 1104553 (-)
Type:
Location: 1103792 - 1104553 (-)
Gene ID: MGYG000003186_1_972
Type: TC
Location: 1104635 - 1105036 (+)
Type: TC
Location: 1104635 - 1105036 (+)
Gene ID: MGYG000003186_1_973
Type: pfam
Location: 1105033 - 1105446 (+)
Type: pfam
Location: 1105033 - 1105446 (+)
Gene ID: MGYG000003186_1_974
Type: TC
Location: 1105548 - 1106549 (+)
Type: TC
Location: 1105548 - 1106549 (+)
Gene ID: MGYG000003186_1_975
Type: TC
Location: 1106546 - 1107250 (+)
Type: TC
Location: 1106546 - 1107250 (+)
Gene ID: MGYG000003186_1_976
Type: TC
Location: 1107351 - 1108187 (+)
Type: TC
Location: 1107351 - 1108187 (+)
Gene ID: MGYG000003186_1_977
Type: STP
Location: 1108273 - 1108911 (-)
Type: STP
Location: 1108273 - 1108911 (-)
Gene ID: MGYG000003186_1_978
Type: pfam
Location: 1108993 - 1109631 (+)
Type: pfam
Location: 1108993 - 1109631 (+)
Gene ID: MGYG000003186_1_979
Type: CAZyme
Location: 1110153 - 1112513 (+)
Type: CAZyme
Location: 1110153 - 1112513 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Gleimia
Species
Gleimia europaea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.