Cluster: MGYG000003184_CGC6
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003184
- CGC Family ID: CGCFAM_00435
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003184_2 | MGYG000003184_2_39 | 43042 | 43839 | + | 3.A.1.13.1 |
| NULL(UNKNOWN) | MGYG000003184_2 | MGYG000003184_2_40 | 43737 | 43958 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003184_2 | MGYG000003184_2_41 | 43966 | 44313 | - | Fe-S_biosyn |
| TC | MGYG000003184_2 | MGYG000003184_2_42 | 44402 | 45820 | - | 2.A.49.5.5 |
| pfam | MGYG000003184_2 | MGYG000003184_2_43 | 45982 | 47262 | + | Aminotran_3 |
| TC | MGYG000003184_2 | MGYG000003184_2_44 | 47341 | 49320 | - | 3.A.1.14.3 |
| TC | MGYG000003184_2 | MGYG000003184_2_45 | 49320 | 50195 | - | 3.A.1.14.3 |
| TC | MGYG000003184_2 | MGYG000003184_2_46 | 50211 | 51005 | - | 3.A.1.14.3 |
| TC | MGYG000003184_2 | MGYG000003184_2_47 | 51058 | 53286 | - | 1.B.14.1.2 |
| CAZyme | MGYG000003184_2 | MGYG000003184_2_48 | 53856 | 56381 | - | GT51 |
Gene ID: MGYG000003184_2_39
Type: TC
Location: 43042 - 43839 (+)
Type: TC
Location: 43042 - 43839 (+)
Gene ID: MGYG000003184_2_40
Type:
Location: 43737 - 43958 (-)
Type:
Location: 43737 - 43958 (-)
Gene ID: MGYG000003184_2_41
Type: pfam
Location: 43966 - 44313 (-)
Type: pfam
Location: 43966 - 44313 (-)
Gene ID: MGYG000003184_2_42
Type: TC
Location: 44402 - 45820 (-)
Type: TC
Location: 44402 - 45820 (-)
Gene ID: MGYG000003184_2_43
Type: pfam
Location: 45982 - 47262 (+)
Type: pfam
Location: 45982 - 47262 (+)
Gene ID: MGYG000003184_2_44
Type: TC
Location: 47341 - 49320 (-)
Type: TC
Location: 47341 - 49320 (-)
Gene ID: MGYG000003184_2_45
Type: TC
Location: 49320 - 50195 (-)
Type: TC
Location: 49320 - 50195 (-)
Gene ID: MGYG000003184_2_46
Type: TC
Location: 50211 - 51005 (-)
Type: TC
Location: 50211 - 51005 (-)
Gene ID: MGYG000003184_2_47
Type: TC
Location: 51058 - 53286 (-)
Type: TC
Location: 51058 - 53286 (-)
Gene ID: MGYG000003184_2_48
Type: CAZyme
Location: 53856 - 56381 (-)
Type: CAZyme
Location: 53856 - 56381 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Mixta
Species
Mixta calida
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.