Cluster: MGYG000003184_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003184
- CGC Family ID: CGCFAM_02219
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003184_1 | MGYG000003184_1_190 | 223218 | 224438 | - | GT81 |
| pfam | MGYG000003184_1 | MGYG000003184_1_191 | 224481 | 225287 | - | S6PP | Hydrolase_3 |
| NULL(UNKNOWN) | MGYG000003184_1 | MGYG000003184_1_192 | 225676 | 225885 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003184_1 | MGYG000003184_1_193 | 226223 | 226381 | + | 9.B.12.2.1 |
| pfam | MGYG000003184_1 | MGYG000003184_1_194 | 226439 | 226636 | + | DSRB |
| TC | MGYG000003184_1 | MGYG000003184_1_195 | 226689 | 228389 | - | 1.B.52.2.1 |
| TF | MGYG000003184_1 | MGYG000003184_1_196 | 228534 | 229169 | - | GerE |
| TC | MGYG000003184_1 | MGYG000003184_1_197 | 229820 | 230605 | - | 3.A.6.2.1 |
| TC | MGYG000003184_1 | MGYG000003184_1_198 | 230653 | 230922 | - | 3.A.6.2.1 |
| TC | MGYG000003184_1 | MGYG000003184_1_199 | 230937 | 231671 | - | 3.A.6.2.1 |
| TC | MGYG000003184_1 | MGYG000003184_1_200 | 231668 | 232075 | - | 3.A.6.2.1 |
| TC | MGYG000003184_1 | MGYG000003184_1_201 | 232075 | 232485 | - | 3.A.6.2.1 |
Gene ID: MGYG000003184_1_190
Type: CAZyme
Location: 223218 - 224438 (-)
Type: CAZyme
Location: 223218 - 224438 (-)
Gene ID: MGYG000003184_1_191
Type: pfam
Location: 224481 - 225287 (-)
Type: pfam
Location: 224481 - 225287 (-)
Gene ID: MGYG000003184_1_192
Type:
Location: 225676 - 225885 (-)
Type:
Location: 225676 - 225885 (-)
Gene ID: MGYG000003184_1_193
Type: TC
Location: 226223 - 226381 (+)
Type: TC
Location: 226223 - 226381 (+)
Gene ID: MGYG000003184_1_194
Type: pfam
Location: 226439 - 226636 (+)
Type: pfam
Location: 226439 - 226636 (+)
Gene ID: MGYG000003184_1_195
Type: TC
Location: 226689 - 228389 (-)
Type: TC
Location: 226689 - 228389 (-)
Gene ID: MGYG000003184_1_196
Type: TF
Location: 228534 - 229169 (-)
Type: TF
Location: 228534 - 229169 (-)
Gene ID: MGYG000003184_1_197
Type: TC
Location: 229820 - 230605 (-)
Type: TC
Location: 229820 - 230605 (-)
Gene ID: MGYG000003184_1_198
Type: TC
Location: 230653 - 230922 (-)
Type: TC
Location: 230653 - 230922 (-)
Gene ID: MGYG000003184_1_199
Type: TC
Location: 230937 - 231671 (-)
Type: TC
Location: 230937 - 231671 (-)
Gene ID: MGYG000003184_1_200
Type: TC
Location: 231668 - 232075 (-)
Type: TC
Location: 231668 - 232075 (-)
Gene ID: MGYG000003184_1_201
Type: TC
Location: 232075 - 232485 (-)
Type: TC
Location: 232075 - 232485 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Mixta
Species
Mixta calida
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.