Cluster: MGYG000003184_CGC33
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: MGYG000003184
- CGC Family ID: CGCFAM_04140
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003184_16 | MGYG000003184_16_1 | 207 | 1646 | - | 4.A.1.2.7 |
| NULL(UNKNOWN) | MGYG000003184_16 | MGYG000003184_16_2 | 1822 | 1992 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003184_16 | MGYG000003184_16_3 | 2297 | 3382 | + | LacI |
| CAZyme | MGYG000003184_16 | MGYG000003184_16_4 | 3518 | 6613 | + | GH2 |
| TC | MGYG000003184_16 | MGYG000003184_16_5 | 6681 | 7943 | + | 2.A.1.5.1 |
| TC | MGYG000003184_16 | MGYG000003184_16_6 | 8021 | 8803 | - | 3.A.6.2.1 |
| TC | MGYG000003184_16 | MGYG000003184_16_7 | 8807 | 9076 | - | 3.A.6.2.1 |
| TC | MGYG000003184_16 | MGYG000003184_16_8 | 9089 | 9841 | - | 3.A.6.2.1 |
| TC | MGYG000003184_16 | MGYG000003184_16_9 | 9838 | 10194 | - | 3.A.6.2.1 |
| TC | MGYG000003184_16 | MGYG000003184_16_10 | 10226 | 10630 | - | 3.A.6.2.1 |
Gene ID: MGYG000003184_16_1
Type: TC
Location: 207 - 1646 (-)
Type: TC
Location: 207 - 1646 (-)
Gene ID: MGYG000003184_16_2
Type:
Location: 1822 - 1992 (-)
Type:
Location: 1822 - 1992 (-)
Gene ID: MGYG000003184_16_3
Type: TF
Location: 2297 - 3382 (+)
Type: TF
Location: 2297 - 3382 (+)
Gene ID: MGYG000003184_16_4
Type: CAZyme
Location: 3518 - 6613 (+)
Type: CAZyme
Location: 3518 - 6613 (+)
Gene ID: MGYG000003184_16_5
Type: TC
Location: 6681 - 7943 (+)
Type: TC
Location: 6681 - 7943 (+)
Gene ID: MGYG000003184_16_6
Type: TC
Location: 8021 - 8803 (-)
Type: TC
Location: 8021 - 8803 (-)
Gene ID: MGYG000003184_16_7
Type: TC
Location: 8807 - 9076 (-)
Type: TC
Location: 8807 - 9076 (-)
Gene ID: MGYG000003184_16_8
Type: TC
Location: 9089 - 9841 (-)
Type: TC
Location: 9089 - 9841 (-)
Gene ID: MGYG000003184_16_9
Type: TC
Location: 9838 - 10194 (-)
Type: TC
Location: 9838 - 10194 (-)
Gene ID: MGYG000003184_16_10
Type: TC
Location: 10226 - 10630 (-)
Type: TC
Location: 10226 - 10630 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Mixta
Species
Mixta calida
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.