Cluster: MGYG000003184_CGC2
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003184
- CGC Family ID: CGCFAM_01286
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003184_1 | MGYG000003184_1_77 | 95822 | 97648 | + | 9.B.22.2.1 |
| TC | MGYG000003184_1 | MGYG000003184_1_78 | 97820 | 99397 | - | 2.A.109.2.3 |
| TC | MGYG000003184_1 | MGYG000003184_1_79 | 100378 | 101508 | + | 1.B.18.3.1 |
| pfam | MGYG000003184_1 | MGYG000003184_1_80 | 101508 | 101948 | + | LMWPc |
| TC | MGYG000003184_1 | MGYG000003184_1_81 | 101961 | 104138 | + | 8.A.3.3.2 |
| CAZyme | MGYG000003184_1 | MGYG000003184_1_82 | 104208 | 105113 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003184_1 | MGYG000003184_1_83 | 105147 | 106241 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003184_1 | MGYG000003184_1_84 | 106242 | 107324 | + | GT4 |
| TC | MGYG000003184_1 | MGYG000003184_1_85 | 107356 | 108801 | + | 9.B.18.1.1 |
| CAZyme | MGYG000003184_1 | MGYG000003184_1_86 | 109018 | 110253 | + | GT4 |
| CAZyme | MGYG000003184_1 | MGYG000003184_1_87 | 110300 | 111307 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003184_1 | MGYG000003184_1_88 | 111269 | 111370 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003184_1 | MGYG000003184_1_89 | 111403 | 112425 | + | PS_pyruv_trans |
| TC | MGYG000003184_1 | MGYG000003184_1_90 | 112425 | 113936 | + | 2.A.66.2.7 |
Gene ID: MGYG000003184_1_77
Type: TC
Location: 95822 - 97648 (+)
Type: TC
Location: 95822 - 97648 (+)
Gene ID: MGYG000003184_1_78
Type: TC
Location: 97820 - 99397 (-)
Type: TC
Location: 97820 - 99397 (-)
Gene ID: MGYG000003184_1_79
Type: TC
Location: 100378 - 101508 (+)
Type: TC
Location: 100378 - 101508 (+)
Gene ID: MGYG000003184_1_80
Type: pfam
Location: 101508 - 101948 (+)
Type: pfam
Location: 101508 - 101948 (+)
Gene ID: MGYG000003184_1_81
Type: TC
Location: 101961 - 104138 (+)
Type: TC
Location: 101961 - 104138 (+)
Gene ID: MGYG000003184_1_82
Type: CAZyme
Location: 104208 - 105113 (+)
Type: CAZyme
Location: 104208 - 105113 (+)
Gene ID: MGYG000003184_1_83
Type:
Location: 105147 - 106241 (+)
Type:
Location: 105147 - 106241 (+)
Gene ID: MGYG000003184_1_84
Type: CAZyme
Location: 106242 - 107324 (+)
Type: CAZyme
Location: 106242 - 107324 (+)
Gene ID: MGYG000003184_1_85
Type: TC
Location: 107356 - 108801 (+)
Type: TC
Location: 107356 - 108801 (+)
Gene ID: MGYG000003184_1_86
Type: CAZyme
Location: 109018 - 110253 (+)
Type: CAZyme
Location: 109018 - 110253 (+)
Gene ID: MGYG000003184_1_87
Type: CAZyme
Location: 110300 - 111307 (+)
Type: CAZyme
Location: 110300 - 111307 (+)
Gene ID: MGYG000003184_1_88
Type:
Location: 111269 - 111370 (-)
Type:
Location: 111269 - 111370 (-)
Gene ID: MGYG000003184_1_89
Type: pfam
Location: 111403 - 112425 (+)
Type: pfam
Location: 111403 - 112425 (+)
Gene ID: MGYG000003184_1_90
Type: TC
Location: 112425 - 113936 (+)
Type: TC
Location: 112425 - 113936 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Mixta
Species
Mixta calida
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.