Cluster: MGYG000003184_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003184
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003184_5 | MGYG000003184_5_146 | 148400 | 152197 | + | GH1 |
| pfam | MGYG000003184_5 | MGYG000003184_5_147 | 152362 | 152919 | + | Ham1p_like |
| pfam | MGYG000003184_5 | MGYG000003184_5_148 | 152916 | 153710 | + | SIR2_2 |
| CAZyme | MGYG000003184_5 | MGYG000003184_5_149 | 153785 | 155833 | - | GH31_4 |
| TC | MGYG000003184_5 | MGYG000003184_5_150 | 155830 | 157212 | - | 2.A.2.3.4 |
Gene ID: MGYG000003184_5_146
Type: CAZyme
Location: 148400 - 152197 (+)
Type: CAZyme
Location: 148400 - 152197 (+)
Gene ID: MGYG000003184_5_147
Type: pfam
Location: 152362 - 152919 (+)
Type: pfam
Location: 152362 - 152919 (+)
Gene ID: MGYG000003184_5_148
Type: pfam
Location: 152916 - 153710 (+)
Type: pfam
Location: 152916 - 153710 (+)
Gene ID: MGYG000003184_5_149
Type: CAZyme
Location: 153785 - 155833 (-)
Type: CAZyme
Location: 153785 - 155833 (-)
Gene ID: MGYG000003184_5_150
Type: TC
Location: 155830 - 157212 (-)
Type: TC
Location: 155830 - 157212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Mixta
Species
Mixta calida
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.