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Cluster: MGYG000003184_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003184_1 MGYG000003184_1_16 18142 19299 + 2.A.1.51.4
pfam MGYG000003184_1 MGYG000003184_1_17 19434 20099 + GTP_cyclohydroI
TC MGYG000003184_1 MGYG000003184_1_18 20128 21282 + 9.B.169.1.2
TF MGYG000003184_1 MGYG000003184_1_19 21439 22479 + LacI
TC MGYG000003184_1 MGYG000003184_1_20 22806 23801 + 3.A.1.2.3
TC MGYG000003184_1 MGYG000003184_1_21 23871 25391 + 3.A.1.2.3
TC MGYG000003184_1 MGYG000003184_1_22 25411 26421 + 3.A.1.2.3
TC MGYG000003184_1 MGYG000003184_1_23 26539 27261 - 9.B.114.1.1
pfam MGYG000003184_1 MGYG000003184_1_24 27400 29097 - malic | Malic_M
pfam MGYG000003184_1 MGYG000003184_1_25 29334 30224 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC MGYG000003184_1 MGYG000003184_1_26 30374 31069 - 2.A.122.1.1
TC MGYG000003184_1 MGYG000003184_1_27 31059 31451 - 1.E.14.1.4
pfam MGYG000003184_1 MGYG000003184_1_28 31587 33620 - tRNA-synt_1 | tRNA_bind | tRNA-synt_1g | Anticodon_3
TC MGYG000003184_1 MGYG000003184_1_29 33834 34946 + 3.A.1.132.3
pfam MGYG000003184_1 MGYG000003184_1_30 34953 36101 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
pfam MGYG000003184_1 MGYG000003184_1_31 36302 36757 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC MGYG000003184_1 MGYG000003184_1_32 37009 39486 - 5.A.3.4.2
TC MGYG000003184_1 MGYG000003184_1_33 39483 40649 - 5.A.3.4.2
TC MGYG000003184_1 MGYG000003184_1_34 41036 42454 - 2.A.1.1.2
peptidase MGYG000003184_1 MGYG000003184_1_35 42745 43242 + I11.001
pfam MGYG000003184_1 MGYG000003184_1_36 43302 43547 + DUF333
CAZyme MGYG000003184_1 MGYG000003184_1_37 43709 44788 + GH103
pfam MGYG000003184_1 MGYG000003184_1_38 44964 45749 - adh_short | KR | adh_short_C2
pfam MGYG000003184_1 MGYG000003184_1_39 45789 46586 - adh_short | KR | adh_short_C2 | SDR
TC MGYG000003184_1 MGYG000003184_1_40 46637 47719 - 3.A.1.2.11
TC MGYG000003184_1 MGYG000003184_1_41 47737 49281 - 3.A.1.2.11
pfam MGYG000003184_1 MGYG000003184_1_42 49283 49903 - DUF2291
TC MGYG000003184_1 MGYG000003184_1_43 49948 50883 - 3.A.1.2.11
Gene ID: MGYG000003184_1_16
Type: TC
Location: 18142 - 19299 (+)
Gene ID: MGYG000003184_1_17
Type: pfam
Location: 19434 - 20099 (+)
Gene ID: MGYG000003184_1_18
Type: TC
Location: 20128 - 21282 (+)
Gene ID: MGYG000003184_1_19
Type: TF
Location: 21439 - 22479 (+)
Gene ID: MGYG000003184_1_20
Type: TC
Location: 22806 - 23801 (+)
Gene ID: MGYG000003184_1_21
Type: TC
Location: 23871 - 25391 (+)
Gene ID: MGYG000003184_1_22
Type: TC
Location: 25411 - 26421 (+)
Gene ID: MGYG000003184_1_23
Type: TC
Location: 26539 - 27261 (-)
Gene ID: MGYG000003184_1_24
Type: pfam
Location: 27400 - 29097 (-)
Gene ID: MGYG000003184_1_25
Type: pfam
Location: 29334 - 30224 (-)
Gene ID: MGYG000003184_1_26
Type: TC
Location: 30374 - 31069 (-)
Gene ID: MGYG000003184_1_27
Type: TC
Location: 31059 - 31451 (-)
Gene ID: MGYG000003184_1_28
Type: pfam
Location: 31587 - 33620 (-)
Gene ID: MGYG000003184_1_29
Type: TC
Location: 33834 - 34946 (+)
Gene ID: MGYG000003184_1_30
Type: pfam
Location: 34953 - 36101 (-)
Gene ID: MGYG000003184_1_31
Type: pfam
Location: 36302 - 36757 (-)
Gene ID: MGYG000003184_1_32
Type: TC
Location: 37009 - 39486 (-)
Gene ID: MGYG000003184_1_33
Type: TC
Location: 39483 - 40649 (-)
Gene ID: MGYG000003184_1_34
Type: TC
Location: 41036 - 42454 (-)
Gene ID: MGYG000003184_1_35
Type: peptidase
Location: 42745 - 43242 (+)
Gene ID: MGYG000003184_1_36
Type: pfam
Location: 43302 - 43547 (+)
Gene ID: MGYG000003184_1_37
Type: CAZyme
Location: 43709 - 44788 (+)
Gene ID: MGYG000003184_1_38
Type: pfam
Location: 44964 - 45749 (-)
Gene ID: MGYG000003184_1_39
Type: pfam
Location: 45789 - 46586 (-)
Gene ID: MGYG000003184_1_40
Type: TC
Location: 46637 - 47719 (-)
Gene ID: MGYG000003184_1_41
Type: TC
Location: 47737 - 49281 (-)
Gene ID: MGYG000003184_1_42
Type: pfam
Location: 49283 - 49903 (-)
Gene ID: MGYG000003184_1_43
Type: TC
Location: 49948 - 50883 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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