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Cluster: MGYG000003180_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003180_2 MGYG000003180_2_29 30712 32250 - 3.A.1.121.3
TF MGYG000003180_2 MGYG000003180_2_30 33075 33824 - HTH_6
CAZyme MGYG000003180_2 MGYG000003180_2_31 34123 35448 + GH4
TC MGYG000003180_2 MGYG000003180_2_32 35531 37093 + 4.A.1.1.3
TC MGYG000003180_2 MGYG000003180_2_33 37321 38574 - 2.A.1.2.25
NULL(UNKNOWN) MGYG000003180_2 MGYG000003180_2_34 38835 39707 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003180_2 MGYG000003180_2_35 39787 40680 + Aldose_epim
TC MGYG000003180_2 MGYG000003180_2_36 40958 41884 + 3.A.1.3.20
TC MGYG000003180_2 MGYG000003180_2_37 41894 43042 + 3.A.1.3.20
TC MGYG000003180_2 MGYG000003180_2_38 43065 43850 + 3.A.1.3.20
Gene ID: MGYG000003180_2_29
Type: TC
Location: 30712 - 32250 (-)
Gene ID: MGYG000003180_2_30
Type: TF
Location: 33075 - 33824 (-)
Gene ID: MGYG000003180_2_31
Type: CAZyme
Location: 34123 - 35448 (+)
Gene ID: MGYG000003180_2_32
Type: TC
Location: 35531 - 37093 (+)
Gene ID: MGYG000003180_2_33
Type: TC
Location: 37321 - 38574 (-)
Gene ID: MGYG000003180_2_34
Type:
Location: 38835 - 39707 (+)
Gene ID: MGYG000003180_2_35
Type: pfam
Location: 39787 - 40680 (+)
Gene ID: MGYG000003180_2_36
Type: TC
Location: 40958 - 41884 (+)
Gene ID: MGYG000003180_2_37
Type: TC
Location: 41894 - 43042 (+)
Gene ID: MGYG000003180_2_38
Type: TC
Location: 43065 - 43850 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003180_2_38 vegetarian > vegan 1.33649 0.00141

🧭 Explore Read Mapping of CGC

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