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Cluster: MGYG000003180_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003180_1 MGYG000003180_1_31 30532 30975 + 4.A.6.1.16
pfam MGYG000003180_1 MGYG000003180_1_32 30975 31256 + YajC
TC MGYG000003180_1 MGYG000003180_1_33 31293 31775 + 4.A.6.1.4
TC MGYG000003180_1 MGYG000003180_1_34 31866 32666 + 4.A.6.1.4
TC MGYG000003180_1 MGYG000003180_1_35 32656 33738 + 4.A.6.1.4
TF MGYG000003180_1 MGYG000003180_1_36 33923 34654 + GntR
STP MGYG000003180_1 MGYG000003180_1_37 34769 35935 + SIS | SIS
CAZyme MGYG000003180_1 MGYG000003180_1_38 36054 37223 + CE9
Gene ID: MGYG000003180_1_31
Type: TC
Location: 30532 - 30975 (+)
Gene ID: MGYG000003180_1_32
Type: pfam
Location: 30975 - 31256 (+)
Gene ID: MGYG000003180_1_33
Type: TC
Location: 31293 - 31775 (+)
Gene ID: MGYG000003180_1_34
Type: TC
Location: 31866 - 32666 (+)
Gene ID: MGYG000003180_1_35
Type: TC
Location: 32656 - 33738 (+)
Gene ID: MGYG000003180_1_36
Type: TF
Location: 33923 - 34654 (+)
Gene ID: MGYG000003180_1_37
Type: STP
Location: 34769 - 35935 (+)
Gene ID: MGYG000003180_1_38
Type: CAZyme
Location: 36054 - 37223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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