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Cluster: MGYG000003173_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003173_9 MGYG000003173_9_4 2638 4014 - GH13_20
TC MGYG000003173_9 MGYG000003173_9_5 4168 5364 - 2.A.1.2.18
TC MGYG000003173_9 MGYG000003173_9_6 5485 7845 - 9.A.8.1.6
peptidase MGYG000003173_9 MGYG000003173_9_7 8319 9218 - S09.UPW
TC MGYG000003173_9 MGYG000003173_9_8 9462 10025 + 4.A.1.2.6
pfam MGYG000003173_9 MGYG000003173_9_9 10207 11610 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) MGYG000003173_9 MGYG000003173_9_10 11870 12655 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003173_9 MGYG000003173_9_11 12816 13796 + 3.A.1.34.1
TC MGYG000003173_9 MGYG000003173_9_12 14000 14923 + 3.A.1.34.1
TC MGYG000003173_9 MGYG000003173_9_13 14916 15710 + 3.A.1.34.1
Gene ID: MGYG000003173_9_4
Type: CAZyme
Location: 2638 - 4014 (-)
Gene ID: MGYG000003173_9_5
Type: TC
Location: 4168 - 5364 (-)
Gene ID: MGYG000003173_9_6
Type: TC
Location: 5485 - 7845 (-)
Gene ID: MGYG000003173_9_7
Type: peptidase
Location: 8319 - 9218 (-)
Gene ID: MGYG000003173_9_8
Type: TC
Location: 9462 - 10025 (+)
Gene ID: MGYG000003173_9_9
Type: pfam
Location: 10207 - 11610 (+)
Gene ID: MGYG000003173_9_10
Type:
Location: 11870 - 12655 (+)
Gene ID: MGYG000003173_9_11
Type: TC
Location: 12816 - 13796 (+)
Gene ID: MGYG000003173_9_12
Type: TC
Location: 14000 - 14923 (+)
Gene ID: MGYG000003173_9_13
Type: TC
Location: 14916 - 15710 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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