Cluster: MGYG000003173_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003173
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003173_41 | MGYG000003173_41_11 | 13097 | 15667 | - | GH106 |
| TF | MGYG000003173_41 | MGYG000003173_41_12 | 15784 | 16791 | + | HTH_AraC |
| CAZyme | MGYG000003173_41 | MGYG000003173_41_13 | 16964 | 18412 | + | GH1 |
| TC | MGYG000003173_41 | MGYG000003173_41_14 | 18676 | 19212 | + | 4.A.1.2.6 |
Gene ID: MGYG000003173_41_11
Type: CAZyme
Location: 13097 - 15667 (-)
Type: CAZyme
Location: 13097 - 15667 (-)
Gene ID: MGYG000003173_41_12
Type: TF
Location: 15784 - 16791 (+)
Type: TF
Location: 15784 - 16791 (+)
Gene ID: MGYG000003173_41_13
Type: CAZyme
Location: 16964 - 18412 (+)
Type: CAZyme
Location: 16964 - 18412 (+)
Gene ID: MGYG000003173_41_14
Type: TC
Location: 18676 - 19212 (+)
Type: TC
Location: 18676 - 19212 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.