Cluster: MGYG000003169_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003169
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003169_12 | MGYG000003169_12_28 | 32223 | 34115 | + | CBM48 | GH13_9 |
| pfam | MGYG000003169_12 | MGYG000003169_12_29 | 34112 | 35317 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000003169_12 | MGYG000003169_12_30 | 35328 | 36443 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000003169_12 | MGYG000003169_12_31 | 36692 | 38113 | + | GT5 |
| CAZyme | MGYG000003169_12 | MGYG000003169_12_32 | 38221 | 40650 | + | GT35 |
| CAZyme | MGYG000003169_12 | MGYG000003169_12_33 | 40723 | 42540 | + | GH13_39 |
| TC | MGYG000003169_12 | MGYG000003169_12_34 | 42874 | 44895 | + | 2.A.1.2.88 |
Gene ID: MGYG000003169_12_28
Type: CAZyme
Location: 32223 - 34115 (+)
Type: CAZyme
Location: 32223 - 34115 (+)
Gene ID: MGYG000003169_12_29
Type: pfam
Location: 34112 - 35317 (+)
Type: pfam
Location: 34112 - 35317 (+)
Gene ID: MGYG000003169_12_30
Type: pfam
Location: 35328 - 36443 (+)
Type: pfam
Location: 35328 - 36443 (+)
Gene ID: MGYG000003169_12_31
Type: CAZyme
Location: 36692 - 38113 (+)
Type: CAZyme
Location: 36692 - 38113 (+)
Gene ID: MGYG000003169_12_32
Type: CAZyme
Location: 38221 - 40650 (+)
Type: CAZyme
Location: 38221 - 40650 (+)
Gene ID: MGYG000003169_12_33
Type: CAZyme
Location: 40723 - 42540 (+)
Type: CAZyme
Location: 40723 - 42540 (+)
Gene ID: MGYG000003169_12_34
Type: TC
Location: 42874 - 44895 (+)
Type: TC
Location: 42874 - 44895 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.