Cluster: MGYG000003169_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003169
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003169_6 | MGYG000003169_6_19 | 22629 | 23588 | - | CE4 |
| pfam | MGYG000003169_6 | MGYG000003169_6_20 | 23769 | 24650 | + | PBP_like_2 | PBP_like_2 |
| TC | MGYG000003169_6 | MGYG000003169_6_21 | 24747 | 25613 | + | 3.A.1.7.5 |
| TC | MGYG000003169_6 | MGYG000003169_6_22 | 25610 | 26509 | + | 3.A.1.7.5 |
| TC | MGYG000003169_6 | MGYG000003169_6_23 | 26509 | 27327 | + | 3.A.1.7.5 |
Gene ID: MGYG000003169_6_19
Type: CAZyme
Location: 22629 - 23588 (-)
Type: CAZyme
Location: 22629 - 23588 (-)
Gene ID: MGYG000003169_6_20
Type: pfam
Location: 23769 - 24650 (+)
Type: pfam
Location: 23769 - 24650 (+)
Gene ID: MGYG000003169_6_21
Type: TC
Location: 24747 - 25613 (+)
Type: TC
Location: 24747 - 25613 (+)
Gene ID: MGYG000003169_6_22
Type: TC
Location: 25610 - 26509 (+)
Type: TC
Location: 25610 - 26509 (+)
Gene ID: MGYG000003169_6_23
Type: TC
Location: 26509 - 27327 (+)
Type: TC
Location: 26509 - 27327 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.