Cluster: MGYG000003169_CGC2
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003169
- CGC Family ID: CGCFAM_01155
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003169_2 | MGYG000003169_2_110 | 121318 | 122208 | - | GH43_17 |
| CAZyme | MGYG000003169_2 | MGYG000003169_2_111 | 122205 | 124385 | - | GH36 |
| pfam | MGYG000003169_2 | MGYG000003169_2_112 | 124478 | 126184 | - | Big_2 | Big_2 | Big-like | Big-like |
| pfam | MGYG000003169_2 | MGYG000003169_2_113 | 126213 | 128039 | - | Big_2 | Big_2 |
| TC | MGYG000003169_2 | MGYG000003169_2_114 | 128057 | 129502 | - | 3.A.1.1.26 |
| TC | MGYG000003169_2 | MGYG000003169_2_115 | 129512 | 130405 | - | 3.A.1.1.36 |
| TC | MGYG000003169_2 | MGYG000003169_2_116 | 130368 | 131345 | - | 3.A.1.1.20 |
| STP | MGYG000003169_2 | MGYG000003169_2_117 | 131367 | 132860 | - | SBP_bac_1 |
| CAZyme | MGYG000003169_2 | MGYG000003169_2_118 | 132879 | 134060 | - | GH43_3 |
| CAZyme | MGYG000003169_2 | MGYG000003169_2_119 | 134090 | 135238 | - | GH43_3 |
Gene ID: MGYG000003169_2_110
Type: CAZyme
Location: 121318 - 122208 (-)
Type: CAZyme
Location: 121318 - 122208 (-)
Gene ID: MGYG000003169_2_111
Type: CAZyme
Location: 122205 - 124385 (-)
Type: CAZyme
Location: 122205 - 124385 (-)
Gene ID: MGYG000003169_2_112
Type: pfam
Location: 124478 - 126184 (-)
Type: pfam
Location: 124478 - 126184 (-)
Gene ID: MGYG000003169_2_113
Type: pfam
Location: 126213 - 128039 (-)
Type: pfam
Location: 126213 - 128039 (-)
Gene ID: MGYG000003169_2_114
Type: TC
Location: 128057 - 129502 (-)
Type: TC
Location: 128057 - 129502 (-)
Gene ID: MGYG000003169_2_115
Type: TC
Location: 129512 - 130405 (-)
Type: TC
Location: 129512 - 130405 (-)
Gene ID: MGYG000003169_2_116
Type: TC
Location: 130368 - 131345 (-)
Type: TC
Location: 130368 - 131345 (-)
Gene ID: MGYG000003169_2_117
Type: STP
Location: 131367 - 132860 (-)
Type: STP
Location: 131367 - 132860 (-)
Gene ID: MGYG000003169_2_118
Type: CAZyme
Location: 132879 - 134060 (-)
Type: CAZyme
Location: 132879 - 134060 (-)
Gene ID: MGYG000003169_2_119
Type: CAZyme
Location: 134090 - 135238 (-)
Type: CAZyme
Location: 134090 - 135238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.