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Cluster: MGYG000003164_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003164_5 MGYG000003164_5_39 46470 47477 + 1.A.23.2.1
STP MGYG000003164_5 MGYG000003164_5_40 47500 49008 - Pyr_redox_2
pfam MGYG000003164_5 MGYG000003164_5_41 49005 49766 - DHODB_Fe-S_bind
TC MGYG000003164_5 MGYG000003164_5_42 49792 50502 - 3.A.25.1.1
CAZyme MGYG000003164_5 MGYG000003164_5_43 50698 52125 + GH13_28
pfam MGYG000003164_5 MGYG000003164_5_44 52416 52688 + Cpn10
pfam MGYG000003164_5 MGYG000003164_5_45 52754 54391 + Cpn60_TCP1
TC MGYG000003164_5 MGYG000003164_5_46 54574 55419 + 3.A.1.124.1
Gene ID: MGYG000003164_5_39
Type: TC
Location: 46470 - 47477 (+)
Gene ID: MGYG000003164_5_40
Type: STP
Location: 47500 - 49008 (-)
Gene ID: MGYG000003164_5_41
Type: pfam
Location: 49005 - 49766 (-)
Gene ID: MGYG000003164_5_42
Type: TC
Location: 49792 - 50502 (-)
Gene ID: MGYG000003164_5_43
Type: CAZyme
Location: 50698 - 52125 (+)
Gene ID: MGYG000003164_5_44
Type: pfam
Location: 52416 - 52688 (+)
Gene ID: MGYG000003164_5_45
Type: pfam
Location: 52754 - 54391 (+)
Gene ID: MGYG000003164_5_46
Type: TC
Location: 54574 - 55419 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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