Cluster: MGYG000003164_CGC29
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003164
- CGC Family ID: CGCFAM_01462
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003164_53 | MGYG000003164_53_1 | 74 | 1987 | + | GH97 |
| CAZyme | MGYG000003164_53 | MGYG000003164_53_2 | 1999 | 3198 | + | CE1 |
| pfam | MGYG000003164_53 | MGYG000003164_53_3 | 3312 | 4295 | - | NTP_transferase | NTP_transf_3 |
| pfam | MGYG000003164_53 | MGYG000003164_53_4 | 4292 | 5449 | - | CTP_transf_like |
| TC | MGYG000003164_53 | MGYG000003164_53_5 | 5457 | 6680 | - | 2.A.1.7.2 |
| pfam | MGYG000003164_53 | MGYG000003164_53_6 | 6776 | 7867 | - | Acyl_transf_3 |
| pfam | MGYG000003164_53 | MGYG000003164_53_7 | 7920 | 9011 | - | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | MGYG000003164_53 | MGYG000003164_53_8 | 9241 | 9981 | - | GT26 |
| CAZyme | MGYG000003164_53 | MGYG000003164_53_9 | 10027 | 11190 | - | GT4 |
| pfam | MGYG000003164_53 | MGYG000003164_53_10 | 11481 | 12554 | - | Acyl_transf_3 |
| CAZyme | MGYG000003164_53 | MGYG000003164_53_11 | 12685 | 13683 | - | GT2 |
| pfam | MGYG000003164_53 | MGYG000003164_53_12 | 13730 | 14635 | - | Acyl_transf_3 |
| NULL(UNKNOWN) | MGYG000003164_53 | MGYG000003164_53_13 | 14775 | 15599 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003164_53 | MGYG000003164_53_14 | 15655 | 16554 | - | GT2 |
| CAZyme | MGYG000003164_53 | MGYG000003164_53_15 | 16554 | 17501 | - | GT32 |
Gene ID: MGYG000003164_53_1
Type: CAZyme
Location: 74 - 1987 (+)
Type: CAZyme
Location: 74 - 1987 (+)
Gene ID: MGYG000003164_53_2
Type: CAZyme
Location: 1999 - 3198 (+)
Type: CAZyme
Location: 1999 - 3198 (+)
Gene ID: MGYG000003164_53_3
Type: pfam
Location: 3312 - 4295 (-)
Type: pfam
Location: 3312 - 4295 (-)
Gene ID: MGYG000003164_53_4
Type: pfam
Location: 4292 - 5449 (-)
Type: pfam
Location: 4292 - 5449 (-)
Gene ID: MGYG000003164_53_5
Type: TC
Location: 5457 - 6680 (-)
Type: TC
Location: 5457 - 6680 (-)
Gene ID: MGYG000003164_53_6
Type: pfam
Location: 6776 - 7867 (-)
Type: pfam
Location: 6776 - 7867 (-)
Gene ID: MGYG000003164_53_7
Type: pfam
Location: 7920 - 9011 (-)
Type: pfam
Location: 7920 - 9011 (-)
Gene ID: MGYG000003164_53_8
Type: CAZyme
Location: 9241 - 9981 (-)
Type: CAZyme
Location: 9241 - 9981 (-)
Gene ID: MGYG000003164_53_9
Type: CAZyme
Location: 10027 - 11190 (-)
Type: CAZyme
Location: 10027 - 11190 (-)
Gene ID: MGYG000003164_53_10
Type: pfam
Location: 11481 - 12554 (-)
Type: pfam
Location: 11481 - 12554 (-)
Gene ID: MGYG000003164_53_11
Type: CAZyme
Location: 12685 - 13683 (-)
Type: CAZyme
Location: 12685 - 13683 (-)
Gene ID: MGYG000003164_53_12
Type: pfam
Location: 13730 - 14635 (-)
Type: pfam
Location: 13730 - 14635 (-)
Gene ID: MGYG000003164_53_13
Type:
Location: 14775 - 15599 (-)
Type:
Location: 14775 - 15599 (-)
Gene ID: MGYG000003164_53_14
Type: CAZyme
Location: 15655 - 16554 (-)
Type: CAZyme
Location: 15655 - 16554 (-)
Gene ID: MGYG000003164_53_15
Type: CAZyme
Location: 16554 - 17501 (-)
Type: CAZyme
Location: 16554 - 17501 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp002361235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.