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Cluster: MGYG000003164_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003164_12 MGYG000003164_12_1 143 1615 - 2.A.1.1.3
pfam MGYG000003164_12 MGYG000003164_12_2 1720 3039 - AP_endonuc_2
pfam MGYG000003164_12 MGYG000003164_12_3 3060 4541 - FGGY_N | FGGY_C
CAZyme MGYG000003164_12 MGYG000003164_12_4 4705 6399 - GH5_4
CAZyme MGYG000003164_12 MGYG000003164_12_5 6600 8096 - GH5_4
TF MGYG000003164_12 MGYG000003164_12_6 8518 12522 + HTH_AraC | HTH_AraC
CAZyme MGYG000003164_12 MGYG000003164_12_7 12771 15653 + GH31_4
CAZyme MGYG000003164_12 MGYG000003164_12_8 15727 18204 + GH2
Gene ID: MGYG000003164_12_1
Type: TC
Location: 143 - 1615 (-)
Gene ID: MGYG000003164_12_2
Type: pfam
Location: 1720 - 3039 (-)
Gene ID: MGYG000003164_12_3
Type: pfam
Location: 3060 - 4541 (-)
Gene ID: MGYG000003164_12_4
Type: CAZyme
Location: 4705 - 6399 (-)
Gene ID: MGYG000003164_12_5
Type: CAZyme
Location: 6600 - 8096 (-)
Gene ID: MGYG000003164_12_6
Type: TF
Location: 8518 - 12522 (+)
Gene ID: MGYG000003164_12_7
Type: CAZyme
Location: 12771 - 15653 (+)
Gene ID: MGYG000003164_12_8
Type: CAZyme
Location: 15727 - 18204 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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