Cluster: MGYG000003156_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003156
- CGC Family ID: CGCFAM_04119
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003156_6 | MGYG000003156_6_21 | 20815 | 21963 | + | 2.A.86.1.3 |
| pfam | MGYG000003156_6 | MGYG000003156_6_22 | 22165 | 23064 | - | AP_endonuc_2 |
| pfam | MGYG000003156_6 | MGYG000003156_6_23 | 23152 | 25005 | - | TPP_enzyme_M | CO_dh | TPP_enzyme_C | TPP_enzyme_N |
| CAZyme | MGYG000003156_6 | MGYG000003156_6_24 | 25009 | 26022 | - | GH179 |
Gene ID: MGYG000003156_6_21
Type: TC
Location: 20815 - 21963 (+)
Type: TC
Location: 20815 - 21963 (+)
Gene ID: MGYG000003156_6_22
Type: pfam
Location: 22165 - 23064 (-)
Type: pfam
Location: 22165 - 23064 (-)
Gene ID: MGYG000003156_6_23
Type: pfam
Location: 23152 - 25005 (-)
Type: pfam
Location: 23152 - 25005 (-)
Gene ID: MGYG000003156_6_24
Type: CAZyme
Location: 25009 - 26022 (-)
Type: CAZyme
Location: 25009 - 26022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900544515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003156_6_22 | vegetarian > omnivore | 1.61001 | 0.00536 |
| MGYG000003156_6_23 | vegetarian > omnivore | 2.87896 | 0.00536 |
| MGYG000003156_6_24 | vegetarian > omnivore | 1.34581 | 0.00536 |