Cluster: MGYG000003155_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003155
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003155_1 | MGYG000003155_1_1 | 2 | 1555 | - | 2.A.6.2.47 |
| TC | MGYG000003155_1 | MGYG000003155_1_2 | 1555 | 2709 | - | 8.A.1.7.1 |
| NULL(UNKNOWN) | MGYG000003155_1 | MGYG000003155_1_3 | 2925 | 4922 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000003155_1 | MGYG000003155_1_4 | 4927 | 5685 | - | S09.UPW |
| CAZyme | MGYG000003155_1 | MGYG000003155_1_5 | 5733 | 6887 | + | GT4 |
| pfam | MGYG000003155_1 | MGYG000003155_1_6 | 6996 | 8927 | + | tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD |
| pfam | MGYG000003155_1 | MGYG000003155_1_7 | 9159 | 9428 | + | DUF2934 |
| TC | MGYG000003155_1 | MGYG000003155_1_8 | 9612 | 10316 | - | 3.A.1.4.10 |
| TC | MGYG000003155_1 | MGYG000003155_1_9 | 10320 | 11054 | - | 3.A.1.4.10 |
| TC | MGYG000003155_1 | MGYG000003155_1_10 | 11054 | 11920 | - | 3.A.1.4.8 |
| pfam | MGYG000003155_1 | MGYG000003155_1_11 | 11924 | 13027 | - | Peripla_BP_6 |
| TC | MGYG000003155_1 | MGYG000003155_1_12 | 13039 | 13908 | - | 3.A.1.4.8 |
Gene ID: MGYG000003155_1_1
Type: TC
Location: 2 - 1555 (-)
Type: TC
Location: 2 - 1555 (-)
Gene ID: MGYG000003155_1_2
Type: TC
Location: 1555 - 2709 (-)
Type: TC
Location: 1555 - 2709 (-)
Gene ID: MGYG000003155_1_3
Type:
Location: 2925 - 4922 (+)
Type:
Location: 2925 - 4922 (+)
Gene ID: MGYG000003155_1_4
Type: peptidase
Location: 4927 - 5685 (-)
Type: peptidase
Location: 4927 - 5685 (-)
Gene ID: MGYG000003155_1_5
Type: CAZyme
Location: 5733 - 6887 (+)
Type: CAZyme
Location: 5733 - 6887 (+)
Gene ID: MGYG000003155_1_6
Type: pfam
Location: 6996 - 8927 (+)
Type: pfam
Location: 6996 - 8927 (+)
Gene ID: MGYG000003155_1_7
Type: pfam
Location: 9159 - 9428 (+)
Type: pfam
Location: 9159 - 9428 (+)
Gene ID: MGYG000003155_1_8
Type: TC
Location: 9612 - 10316 (-)
Type: TC
Location: 9612 - 10316 (-)
Gene ID: MGYG000003155_1_9
Type: TC
Location: 10320 - 11054 (-)
Type: TC
Location: 10320 - 11054 (-)
Gene ID: MGYG000003155_1_10
Type: TC
Location: 11054 - 11920 (-)
Type: TC
Location: 11054 - 11920 (-)
Gene ID: MGYG000003155_1_11
Type: pfam
Location: 11924 - 13027 (-)
Type: pfam
Location: 11924 - 13027 (-)
Gene ID: MGYG000003155_1_12
Type: TC
Location: 13039 - 13908 (-)
Type: TC
Location: 13039 - 13908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAJLXD01
Species
CAJLXD01 sp900551585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.