Cluster: MGYG000003152_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003152
- CGC Family ID: CGCFAM_00034
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003152_2 | MGYG000003152_2_74 | 104421 | 106304 | - | GH13_46 |
| CAZyme | MGYG000003152_2 | MGYG000003152_2_75 | 106376 | 108283 | - | GH13_14 |
| CAZyme | MGYG000003152_2 | MGYG000003152_2_76 | 108437 | 111130 | - | GH77 |
| CAZyme | MGYG000003152_2 | MGYG000003152_2_77 | 111595 | 114069 | + | GH13_6 |
| NULL(UNKNOWN) | MGYG000003152_2 | MGYG000003152_2_78 | 114080 | 114256 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003152_2 | MGYG000003152_2_79 | 115133 | 116461 | - | 2.A.2.6.2 |
| STP | MGYG000003152_2 | MGYG000003152_2_80 | 116627 | 117523 | - | Peripla_BP_3 |
| TC | MGYG000003152_2 | MGYG000003152_2_81 | 117932 | 120997 | + | 1.B.14.6.1 |
| TC | MGYG000003152_2 | MGYG000003152_2_82 | 121019 | 122653 | + | 8.A.46.1.1 |
| pfam | MGYG000003152_2 | MGYG000003152_2_83 | 122723 | 123880 | + | SusE |
| pfam | MGYG000003152_2 | MGYG000003152_2_84 | 123963 | 124970 | + | SusF_SusE |
| CAZyme | MGYG000003152_2 | MGYG000003152_2_85 | 125317 | 127332 | + | GH13_7 |
| TC | MGYG000003152_2 | MGYG000003152_2_86 | 127812 | 129167 | + | 2.A.13.1.3 |
Gene ID: MGYG000003152_2_74
Type: CAZyme
Location: 104421 - 106304 (-)
Type: CAZyme
Location: 104421 - 106304 (-)
Gene ID: MGYG000003152_2_75
Type: CAZyme
Location: 106376 - 108283 (-)
Type: CAZyme
Location: 106376 - 108283 (-)
Gene ID: MGYG000003152_2_76
Type: CAZyme
Location: 108437 - 111130 (-)
Type: CAZyme
Location: 108437 - 111130 (-)
Gene ID: MGYG000003152_2_77
Type: CAZyme
Location: 111595 - 114069 (+)
Type: CAZyme
Location: 111595 - 114069 (+)
Gene ID: MGYG000003152_2_78
Type:
Location: 114080 - 114256 (+)
Type:
Location: 114080 - 114256 (+)
Gene ID: MGYG000003152_2_79
Type: TC
Location: 115133 - 116461 (-)
Type: TC
Location: 115133 - 116461 (-)
Gene ID: MGYG000003152_2_80
Type: STP
Location: 116627 - 117523 (-)
Type: STP
Location: 116627 - 117523 (-)
Gene ID: MGYG000003152_2_81
Type: TC
Location: 117932 - 120997 (+)
Type: TC
Location: 117932 - 120997 (+)
Gene ID: MGYG000003152_2_82
Type: TC
Location: 121019 - 122653 (+)
Type: TC
Location: 121019 - 122653 (+)
Gene ID: MGYG000003152_2_83
Type: pfam
Location: 122723 - 123880 (+)
Type: pfam
Location: 122723 - 123880 (+)
Gene ID: MGYG000003152_2_84
Type: pfam
Location: 123963 - 124970 (+)
Type: pfam
Location: 123963 - 124970 (+)
Gene ID: MGYG000003152_2_85
Type: CAZyme
Location: 125317 - 127332 (+)
Type: CAZyme
Location: 125317 - 127332 (+)
Gene ID: MGYG000003152_2_86
Type: TC
Location: 127812 - 129167 (+)
Type: TC
Location: 127812 - 129167 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella denticola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.